Canis lupus familiaris (dog): 612161
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Entry
612161 CDS
T01007
Symbol
FANCL
Name
(RefSeq) E3 ubiquitin-protein ligase FANCL isoform X5
KO
K10606
E3 ubiquitin-protein ligase FANCL [EC:
2.3.2.27
]
Organism
cfa
Canis lupus familiaris (dog)
Pathway
cfa03460
Fanconi anemia pathway
cfa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
612161 (FANCL)
09124 Replication and repair
03460 Fanconi anemia pathway
612161 (FANCL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cfa04121
]
612161 (FANCL)
03400 DNA repair and recombination proteins [BR:
cfa03400
]
612161 (FANCL)
Enzymes [BR:
cfa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
612161 (FANCL)
Ubiquitin system [BR:
cfa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
612161 (FANCL)
DNA repair and recombination proteins [BR:
cfa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
612161 (FANCL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCL_d3
FANCL_C
FANCL_d2
FANCL_d1
zf-RING_2
SLX1_C
zf-HC5HC2H
zf-RING-like
zf-rbx1
Nup96
Motif
Other DBs
NCBI-GeneID:
612161
NCBI-ProteinID:
XP_013973013
Ensembl:
ENSCAFG00000002940
VGNC:
40724
LinkDB
All DBs
Position
10:complement(58474427..58590338)
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AA seq
398 aa
AA seq
DB search
MAEMEASLLRQFPLLLPQNRAKTVYEGFISAQHPVSKGCIYLPFYHLMLVYFFSKGRDFH
LKILLPEDLQMKNARLLCSWQLKTILNGYHQIVQQRMQHSPDLMSFMMELKMVLEVALKN
KQELYAPPPPPQFYSSLMEEIGTLGWDKLVYVDTCLSTIKLKAEDASGRKHLITLKLKTK
YPTESPDCVVDFPVSFSVSWTPQSSLISIYSQFLAALESLKAFWDVMDEIDEKTWVLEPE
KPTRSATTRRIALENRASINIEVDPRHPTMLPECCFLGADHVVKPLGIKLSRNIHLWDPE
NSLLQNLKDVLEIDFPARANLEKSDFSMDCGICYAYQLDGAIPDQVCDNLQCGQPFHQIC
LYEWLRGLLTSRQSFNIIFGECPYCSKPITLKMSVRKS
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggcggagatggaggcgagcctgttgcgtcagttcccgctgcttctgccccagaaccgg
gcgaaaaccgtgtacgagggattcatttcggctcagcacccagtttccaagggatgtatt
tacctccctttttatcatcttatgcttgtgtatttcttttccaagggacgtgattttcac
cttaaaatattgttgcctgaagatttacaaatgaagaatgcaaggttattatgtagttgg
caactgaaaacaatacttaatggataccatcaaatagtgcaacagagaatgcagcactct
cctgatttaatgagctttatgatggagttgaagatggttttggaagttgctttaaagaat
aaacaagagctgtatgcaccacctcctcctccccagttctactcaagccttatggaagaa
ataggaactcttggttgggataaacttgtatacgtggatacttgtctcagtactatcaag
ttaaaagctgaagatgcttctggtagaaagcatctcattactctcaagttgaagacaaag
taccctacagaatcaccagattgtgttgtggattttcctgtttcattttctgtttcctgg
acaccacagagttccttaataagcatttacagtcagtttttggcagccttagaatcactg
aaggccttctgggatgttatggatgaaatcgatgagaagacttgggtacttgagccagaa
aaacctacccggagtgcaacaacacgcagaattgcactagagaatagggcttcaataaat
atagaggttgaccccaggcatcccactatgcttcctgagtgctgctttcttggagctgac
catgtggtaaaaccgctgggaattaaactgagcagaaacatacatttgtgggatccagaa
aatagtctgttacaaaacttgaaagatgttttagaaatagattttccagctcgtgctaac
ctggaaaaatctgatttttctatggattgtgggatttgttatgcctatcagcttgatggt
gccattcctgatcaagtgtgtgataatttacaatgtggacagcctttccatcaaatatgc
ttatacgagtggttgagaggactactgactagtagacagagttttaacatcatatttggt
gaatgcccatattgcagcaagccaattaccttgaaaatgtctgtgaggaaatcctga
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integrated database retrieval system
