Canis lupus familiaris (dog): 612196
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Entry
612196 CDS
T01007
Symbol
PARPBP
Name
(RefSeq) PCNA-interacting partner isoform X2
KO
K27412
PCNA-interacting partner
Organism
cfa
Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfa03400
]
612196 (PARPBP)
DNA repair and recombination proteins [BR:
cfa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
612196 (PARPBP)
TLS (translesion DNA synthesis) factors
Other TLS factors
612196 (PARPBP)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PARI_N
Motif
Other DBs
NCBI-GeneID:
612196
NCBI-ProteinID:
XP_022259138
Ensembl:
ENSCAFG00000007291
VGNC:
44267
LinkDB
All DBs
Position
15:41340064..41407033
Genome browser
AA seq
529 aa
AA seq
DB search
MHSGEFTVSLSDVLLTWKYFLHEKLNLSVENMEVIDHYEDIKKTYDDFLKKSNMLDLIDV
YKKCILISSCEYNANISPSQLRDFLSGRQYEVADETDLYVPTSPVSKHNQDNEKVQLLAR
KIIYSYLNLLVNLKNDLALAHILNIPDRGLGREAFTDLKHAAQEKKMSIFLVATSFIRTL
ELGGKGYAPSPSDPLRAHVKGLSNFINFIDKLDEILGEIPNPSIAGGRILSVIKMQLIKG
QNSRDPFCKAVEEVAQDLDLRIKNIINSQQGDVAVSTTDISPARPKSYAINHGTAYCGRD
TVKTLLVLLDEEAASMPTKNKAELLYDDENTVHNNGISILTLFRSPIQVKNSSMKSLRER
ICKSMQEKKIKMKQTLIRSQFTCTYKDDCTISKDKWNDINSASKPLSILHVENDFSEGVN
SSVGRPTIGTSSGNVHLDRSKSEKVARKPSSQTGSKSSKRKQVDLDDKNNLCDYENEPAQ
HKNVKIPKTSNNFQNKLCGKIVGVAKNNKCTAKNKLITGQTKLTQFFRL
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgcacagtggagaatttaccgtttctctgagcgatgtcttattgacctggaaatacttc
ctacatgagaagttgaacttatcagttgaaaatatggaagtgattgaccattatgaggac
attaagaagacttatgatgatttcttaaagaagagtaatatgctagatctgattgatgtt
tataaaaaatgtattttgatttctagttgtgaatataatgccaacatatcccctagtcaa
ctacgggattttctgtctgggagacagtatgaagtagctgatgaaactgatctttatgta
ccaacatcaccagtgagtaaacacaaccaggacaatgaaaaggtgcagttattagcaaga
aaaattatctactcatatttaaatctgctggtgaatttgaagaatgacctggctctggct
catattctcaatattcctgatagaggacttggaagagaagccttcactgatttgaaacat
gctgctcaagagaaaaagatgtctatctttttggtggccacatcatttattagaacacta
gagcttggagggaagggatatgcaccatcgccatctgatcctttaagggcacatgtaaaa
ggactgtctaatttcattaacttcattgacaaattagatgagattcttggagaaatacca
aatccaagcattgcagggggtcggatactctcagtgataaagatgcagctgattaaaggc
cagaacagcagggatcctttttgtaaagcagtagaggaagttgctcaggatttggatttg
aggattaaaaatattatcaattctcaacaaggagatgtagctgttagtactactgacatc
agtcctgcccggccaaagtcttatgccataaaccatgggactgcatactgtggcagagat
actgtgaaaactttactagttcttttggatgaagaagcagccagtatgcctaccaaaaac
aaagcagagcttttatatgatgatgaaaacacagttcataataatggaatttctattctt
acactttttagatctcccatacaagtgaaaaattcatcaatgaaatctctaagagaacgc
atctgtaagtcaatgcaagagaaaaaaattaagatgaagcaaaccttaattagatctcag
tttacttgtacttacaaagacgactgcacaataagcaaggataaatggaatgatattaat
tcagcatcaaagcctttgtctatccttcacgtggaaaatgacttttctgaaggtgtaaat
tcatctgttggaaggccaacaattggaacaagttctggaaatgttcatctggacagaagt
aaaagtgaaaaagtagcaagaaaaccaagtagtcagacaggaagtaaaagctcaaaaagg
aaacaggtggacttagatgataaaaataatctctgtgattatgaaaatgaaccagcgcaa
cataaaaatgttaagatacccaagacatcaaacaatttccagaataaattgtgtggcaaa
atagttggagtagcaaaaaataacaagtgtacggccaagaataaattgattactggccag
acaaagttaactcaattttttaggctatga
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integrated database retrieval system
