Canis lupus familiaris (dog): 612242
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Entry
612242 CDS
T01007
Symbol
SIX5
Name
(RefSeq) homeobox protein SIX5
KO
K19474
homeobox protein SIX5
Organism
cfa
Canis lupus familiaris (dog)
Brite
KEGG Orthology (KO) [BR:
cfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cfa03000
]
612242 (SIX5)
Transcription factors [BR:
cfa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
612242 (SIX5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
612242
NCBI-ProteinID:
XP_038279607
VGNC:
53984
UniProt:
A0A8P0PR37
A0A8I3MP92
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All DBs
Position
1:109320839..109324964
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AA seq
742 aa
AA seq
DB search
MATLPAEPSAGPAAGGEAVAAAATEEEEEEARQLLQTLQAAEGEAAAAAAAGAGAGEAAA
GAEGPGSPGVPGSPPEAAAEPPTGLRFSPEQVACVCEALLQAGHAGRLSRFLGALPPAER
LRGSDPVLRARALVAFQRGEYAELYRLLESRPFPAAHHAFLQDLYLRARYHEAERARGRA
LGAVDKYRLRKKFPLPKTIWDGEETVYCFKERSRAALKACYRGNRYPTPDEKRRLATLTG
LSLTQVSNWFKNRRQRDRTGGGGGAPCKSESDGNPTTEDESSRSPEDLDRGVAPVAAEAP
AQGSLFLAGAAPPAPCPASSSILVNGSFLAAGSSPAVLLNGSPVIINSLALGEASSLGPL
LLAGGSGAPPPQPGAPGPGEGKTSLVLDPQTGEVRLEEAPPEAPETKEAQVAASGTPAEE
AAGPLPQVVPGPPPAATFPLPPGPVPSVAAPQVVPLSPPPGYPAGLGPASPLLNLPQVVP
TSQVVTLPQAVGPLQLLAAGPGSPVKVAATAGPANVHLINSGVGVTALQLPSAAAPGNFL
LANPVSGSPIVTGVAVQQGKIILTATFPTSMLVSQVLPPAPSLALPLKPDAAISVPEGAL
PVAPSPALPDVHALGPLSAQQPPQPPPGPATAAAATSLPFADSSALLPGFPAPPPEGLML
SPAAMPIWPAGLELSGGTEGLLEAEKGLGTQAPHTVLRLPDPDPEGLLLGSAAGGEADEG
LEAEPKVLTQLQSVPVEDSLEL
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggctaccttgcctgcggagccgagcgcggggccggcggccgggggggaggcggtggcg
gcggcggcgaccgaagaagaggaggaggaagcgcgccagctcctgcagactttgcaggcg
gccgagggtgaggcggcggccgcggccgcggccggggccggggcgggcgaagcggcggcg
ggagcggagggcccgggatccccgggcgtccccgggtcgccccccgaggccgctgccgag
ccgcccacgggcctccgcttctcgcccgagcaggtggcgtgcgtctgcgaggcgctgcta
caggcgggccacgccggccgcttgagccgcttcctgggcgcgctgcccccggccgagcgc
ctacgtggcagcgatccggtgctgcgcgctcgggccctggtggccttccagcggggcgag
tacgccgagctctaccggctgctcgagagccgccccttccccgccgcccaccacgccttt
ctgcaggacctctacctgcgcgcgcgctaccacgaggccgagcgggcccgcggccgcgcg
ctgggcgcagtggacaagtaccgtctgcgcaagaagttcccgctgcccaagaccatatgg
gacggcgaggagaccgtctactgcttcaaggagcgctcccgcgccgcgctcaaggcctgc
tatcgcggcaaccgctaccctacgccggacgagaagcgccgcctggccacgctcaccggc
ctctcgctcacgcaggtcagcaactggttcaagaaccggcgacagcgcgatcggaccggg
ggcggcggcggcgcgccttgcaagagcgagtctgacgggaaccccaccacggaggacgag
tccagccgcagccccgaggacctggacaggggggtggctccggtggccgcggaggccccc
gcccagggctctctattcctggccggggccgccccgcccgcgccctgccccgcctcctcg
tccatcctggtgaacgggagcttcctggcggcgggcagctcccccgccgtgctcctcaac
gggagccccgtcatcatcaacagcctggccctcggggaggcctccagcctgggccccctg
ctgctggcgggcggcagtggcgcccctcctccgcagcccggtgccccggggcccggcgag
ggcaagacctccctggtcctggacccgcagaccggggaggttcgactagaggaggctccg
cccgaggcccccgagaccaaggaggcccaggtggccgcttctgggacgcctgcagaggag
gccgcggggccgctgccccaagtggtgcctgggcccccaccggctgccaccttccccctg
cccccgggaccggtgccttctgtggccgctccccaagtggtgccgctctctcccccgccg
gggtacccggcaggcctgggccccgcctccccgctgttgaacctgccccaggtggtgccc
acctctcaggtggtgaccctgccccaggctgtggggccgctgcagctgttagccgccggc
ccgggcagccccgtgaaggtggcggccactgcgggccctgccaatgtgcacctgataaac
tccggggtgggcgtgacggccctgcagcttccttcggccgctgcgccaggaaactttctc
ctggccaacccggtgtccggcagccccatcgtgacgggcgtggccgtccagcagggcaag
atcatcctcaccgccaccttccccacgagcatgctggtctcccaggtcctgccgcctgcc
cccagcctggccctgcccctgaagccagacgcggccatctcggtgcccgaaggagccctc
ccggtggcccccagcccggctctccccgacgtccacgccctcggcccgctttccgcacag
cagccgccgcagccaccgcccggccccgccactgccgccgcagccaccagcctgcccttc
gcggattcctcggctctcctcccgggcttcccggcgccgccgcccgaagggctcatgctg
tcgcccgcggccatgcccatctggccggcagggctggaactgagcggcggcacagaaggg
ctgctggaagcagagaaggggctggggacgcaggccccccacactgtgctgaggctgccg
gaccccgaccccgaggggctgctcctggggtctgcggcagggggcgaggcggatgagggg
ctggaggccgagccgaaggttctgacgcagctccagtcggtgcctgtggaagattccctg
gaactgtga
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