Corynebacterium faecale: CFAEC_02075
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Entry
CFAEC_02075 CDS
T09289
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cfac
Corynebacterium faecale
Pathway
cfac03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cfac00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CFAEC_02075 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfac03021
]
CFAEC_02075 (rpoC)
03400 DNA repair and recombination proteins [BR:
cfac03400
]
CFAEC_02075 (rpoC)
Enzymes [BR:
cfac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CFAEC_02075 (rpoC)
Transcription machinery [BR:
cfac03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CFAEC_02075 (rpoC)
DNA repair and recombination proteins [BR:
cfac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CFAEC_02075 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
WJY91270
LinkDB
All DBs
Position
449339..453340
Genome browser
AA seq
1333 aa
AA seq
DB search
MLDVNVFDELRIGLATADDIRRWSKGEVKKPETINYRTLKPEKDGLFCERIFGPTRDWEC
ACGKYKRVRYKGIICERCGVEVTKSKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLDLIIYFGANIITSVDDEARHSDQSTLEAEMLLEKKDVEADAEADIADRAEKLEED
LAELEAAGAKADARRKVQNAAEKEMQHIRERSEREIDRLEEIWQTFIKLAPKQMIRDEKL
YDELVDRYEDYFTGGMGAESIQTLIRGFDLDAESEELRDIIQNGKGQKKMRALKRLKVVA
AFQRSGNDPAGMVLNAIPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRMIEL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLRLHECGLPKLMALELFKPFVMKRLVENEYAQNIKSAKRMVERQR
PEVWDVLEEAISEHPVMLNRAPTLHRLGIQAFEPVLVEGKAIQLHPLACEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLASNNILSPASGKPLAMPRLDMVTGLYYLTLKKSPEEFGGQ
GAYRAADENGPEKGVYSSYAEAIMAYDRGVLGLQAPIKIRLDHLRPPVEREDELFPDGWK
QGDTWLATTTLGRVMFNEILPWNYPYLEGIMLRKGGGSDKIMLGDVVNDLAAKYPMITVA
QTMDKMKDAGFYWSTRSGVTIAMSDVLVLPNKDEILDRYEASARQIEVKYSRGKLTGRER
YDRLVELWKDATDEVGQAVEDLYPDDNPIPMIVKSGAAGNMRQIWTLAGMKGMVVNSKGD
YITRPIKTSFREGLTVLEYFNNSHGSRKGLADTALRTADSGYLTRRLVDVAQDVIVRVED
CATRQGVRVPVAAEVLDSTGAVTGYTRHDLIETSVSGRVLAGDATNAEGEVILAAGTDLT
ELNIDLLVEAGIEQVKVRSVLTCQTPTGVCAKCYGKSMASGQQVDIGEAVGIVAAQSIGE
PGTQLTMRTFHQGGVGGDITGGLPRVQELFEARVPKNRAPIASADGVVHLEDEGNFYTLT
VVPDDGSDNVVYEKLSKRQGLASLRVPMESNPGAFIERTLAEGDRVTVGTRLLRGAADPH
DVLEILGRRGVEQHLIDEVQAVYRAQGVAIHDKHIEIIIRQMLRRGTVIESGSTEFLPGS
LVDLSEAKLANSEAISNGGQPAELRSEIMGITKASLATESWLSAASFQETTRVLTDAAIN
KRSDKLIGLKENVIIGKLIPAGTGISRYRNISIKPTEAARNAAYSIPTYGESIYGDDGFG
EFTGASVPLDEAF
NT seq
4002 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtaaacgtcttcgatgagctccgcatcggcctggccactgccgacgacatc
cgccgctggtccaagggtgaggtcaagaagccggagaccatcaactaccgaaccctcaag
cctgagaaggacggtctgttctgcgaacgcatcttcggcccgacccgcgactgggaatgc
gcctgcggtaagtacaagcgcgtccgctacaagggcatcatctgtgaacgctgtggcgtt
gaggtgaccaagtccaaggttcgccgtgagcgcatgggccacattgagctcgccgcaccg
gtgacccacatctggtacttcaagggcgtgccttcacgtctgggttaccttctggacctt
gctccgaaggacctggatctgatcatctacttcggtgccaacatcatcaccagtgttgat
gacgaagcccgtcacagcgatcagtcgaccctggaagctgagatgcttctggagaagaag
gacgttgaggcagacgccgaggcggatatcgccgaccgcgctgagaagctcgaagaggat
ctcgctgagctcgaggccgccggcgccaaggccgacgcacgccgcaaggttcagaatgct
gctgagaaggaaatgcagcatatccgtgagcgctccgagcgtgagatcgatcgcctcgag
gagatctggcagaccttcatcaagcttgccccgaagcagatgatccgtgacgagaagctc
tacgacgagctcgttgaccgttacgaggactacttcaccggcggcatgggtgcagaatcc
atccagaccctcatccgcggcttcgatctcgatgccgagtctgaggaactgcgcgacatc
attcagaatggcaagggccagaagaagatgcgtgcgctgaagcgactcaaggtcgttgca
gccttccagcgctccggcaacgatccagccggcatggtgctcaacgccattccagtgatc
ccgccagagctgcgtccgatggttcagctcgacggtggccgtttcgccacctccgacctg
aacgatctctaccgtcgcgtgatcaaccgcaacaaccgcctcaagcgcatgatcgaactc
ggtgcacccgagatcatcgtgaacaacgagaagcgcatgctgcaggaatctgtggacgca
ctcttcgacaacggtcgtcgtgggcgtccagtcaccggaccgggcaaccgtccgctgaag
tccctgtctgacctcctgaagggcaagcagggtcgattccgccagaaccttctgggtaag
cgtgttgactactccggtcgttcggtgatcatcgttggtccacagctgcgtctgcacgag
tgtggtctgccgaagctgatggctcttgagctgttcaagcctttcgtgatgaagcgtctc
gtggaaaacgagtacgcccagaacatcaagtccgccaagcgcatggttgagcgtcagcgt
ccagaggtgtgggatgtcctcgaagaggccatctccgagcacccggtgatgctgaaccgc
gcaccaaccctgcaccgcctcggtatccaggctttcgagcctgtgcttgttgagggtaag
gccatccagctgcacccactggcctgtgaagcgttcaacgccgacttcgacggtgaccag
atggcagttcacctgccactgtccgctgaagcacaggctgaggcccgcatcctgatgctc
gcctccaacaacatcctgtccccggcgtccggtaagccactggccatgccacgtctggac
atggtgaccggtctgtactacctgaccctcaagaagtccccagaggagttcggtggccag
ggtgcgtacagggctgccgatgagaacggcccggagaagggtgtctactcttcctacgct
gaggccatcatggcctacgaccgtggtgttctcggcctgcaggcaccgatcaagatccgt
cttgatcacctgcgtccgccggtggagcgtgaagatgagctgttcccagatggttggaag
cagggcgatacctggcttgccaccaccacactgggtcgcgtcatgttcaatgagatcctg
ccgtggaactacccgtacctcgagggcatcatgctccgtaagggcggcggctccgacaag
atcatgctcggcgacgtggtcaatgacctcgctgccaagtacccgatgatcaccgtggcg
cagaccatggacaagatgaaggatgccggcttctactggtccacccgctcgggtgtcacc
atcgccatgtccgacgttctggttctgccgaacaaggacgagatccttgaccgctacgag
gcatctgcacgtcagatcgaagtgaagtacagccgcggtaagctcaccggccgtgagcgc
tatgaccgtctggttgagctctggaaggacgcaaccgatgaggtcggtcaggctgtcgag
gatctctatcctgatgacaacccgattccgatgatcgtgaagtccggtgctgccggtaac
atgcgtcagatctggacccttgccggtatgaagggcatggttgtgaactcgaagggtgac
tacatcacccgtccgatcaagacctccttccgtgagggactgaccgttctcgagtacttc
aacaactcccacggttcccgtaagggccttgccgataccgcgctgcgtaccgctgactcc
ggctacctgacccgtcgtctcgtcgacgtggcgcaggatgtcattgtccgcgtcgaggat
tgtgccacccgccagggtgtgcgcgttccagtggctgcagaggttctcgactccaccggc
gctgtcaccggttacacccgccatgacctgatcgagacctccgtgtccggtcgtgtcctg
gcaggcgacgccaccaacgctgaaggcgaagtcatcctcgcagcgggcaccgacctgacg
gagctcaacatcgacctcctcgttgaggccggtatcgagcaggtcaaggtgcgctccgtg
ctcacctgtcagaccccgaccggtgtctgtgccaagtgctacggcaagtccatggcatcc
ggccagcaggtcgacatcggagaggctgtcggtattgttgccgcacagtccattggtgag
cctggtacccagctgacaatgcgtaccttccaccagggtggtgtcggtggcgatatcacc
ggcggtctgccccgtgtgcaggagctgttcgaggcacgtgttccgaagaaccgtgcaccg
atcgcctctgccgacggtgtggtccacctcgaggatgagggcaacttctacaccctgacc
gtcgtccctgatgatggctcagacaatgttgtctacgagaagctgtccaagcgacagggg
ctcgcatccctgcgtgtgccgatggaatccaacccaggtgcgttcatcgagcgcaccctg
gcagagggtgaccgcgtcaccgttggtactcgtctgctgcgcggtgcggctgatccgcat
gacgtcctggagattctgggtcgtcgtggtgtggagcagcacctcattgatgaggtgcag
gctgtctaccgtgcacagggtgtggccatccacgataagcacatcgagatcatcatccgt
cagatgctgcgtcgcggtaccgttatcgagtccggttccaccgagttcctcccaggttca
ctcgtggacctgtccgaggcgaagctggccaactcggaggccatctccaacggtggtcag
ccggcggagctgcgttctgagatcatgggtatcaccaaggcgtcgctggcaaccgagtcc
tggctgtccgcggcctccttccaggagaccacccgcgtgctcaccgatgctgccatcaac
aagcgctccgacaagctgatcggcctgaaggagaacgtgatcatcggtaagctgatcccg
gccggtaccggtatctcccgttaccgaaacatctcgatcaagcccaccgaggcggcccgc
aacgccgcctactcgatccccacctatggtgagtcgatttacggtgacgacggcttcggt
gaattcaccggtgcctccgtcccactggatgaggccttctaa
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