Corynebacterium faecale: CFAEC_03370
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Entry
CFAEC_03370 CDS
T09289
Symbol
uvrD2
Name
(GenBank) ATP-dependent DNA helicase UvrD1
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cfac
Corynebacterium faecale
Pathway
cfac03420
Nucleotide excision repair
cfac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cfac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CFAEC_03370 (uvrD2)
03430 Mismatch repair
CFAEC_03370 (uvrD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfac03400
]
CFAEC_03370 (uvrD2)
Enzymes [BR:
cfac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CFAEC_03370 (uvrD2)
DNA repair and recombination proteins [BR:
cfac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CFAEC_03370 (uvrD2)
MMR (mismatch excision repair)
Other MMR factors
CFAEC_03370 (uvrD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
WJY91528
LinkDB
All DBs
Position
716746..719958
Genome browser
AA seq
1070 aa
AA seq
DB search
MAKVSPVLLSRMLGQEHAPTDQQAAIIGSEPGPLLVVAGAGAGKTETMAARVVWLVANGL
VAPDQVLGLTFTRKAAQQLSQRIRHRLETLAGIPTLRDIDPTGGIARDLQAITPTVSTYD
SYAGSLIREYGLLLPVEPSARLITQTELYHIARQVVDNYRGELTASQSPATVTEYLLKLV
SEMDNHMVDPEDIVDESWPFINLFDELPKGPRQRDALSQTMVGWRDTQITRLQYLPLVEQ
LKQELHDRAVITFGEQMSKAARLASTHPQVGYSQRRRFRVVMLDEYQDTSHSQRVLLRSL
FGGTDPGLTVNAVGDPMQAIYGWRGATAANLENFIGDFPKISLETRTDAPKRELTTSWRN
PPEVLELANAVSAEVLGPGPTRTVQPLQPRPGAPTGEVSIGWFATAQEERTFVADEIKKY
WDARSEKFTAAVLVRKRRHSEPMAAELRARGIPVEIVGLSGLLDVPEVADMVAIATMLVR
PQDNRASLRILGGPHVGLGVADIQVLQKRAANIAGRVRSWEEKLQPEDPLEKLAAQIADT
VPAEPEEIVGLADAVSDLGEATDFSEEGLRRLRRLSAQLRHLRTSSLGRSVADIFADIED
VFGIRTEVLARENPRADGAVGTVHLDRFADEVAAHSSIGLPELLDYFQLAQNQEDGLEPG
EVTVRSDRVQILTVHKAKGLEWDIVSVLHADAGTYDAKASTWLTNVTAVPSTLRGDAGEG
TPVLDTSGAEDRKELENACKDYIAEVREGLAEENSRLFYVGITRSERVLMVTGSAIDGTT
VKPKSPYSHLEILKSTAPDAVVTWWEGDEADVAKLPPEEGIYPQVAASAGMAEGAALVRA
TPVAASQDGGLEELWEREVTVLIDEHHRLQSPTLAVEISRELTATDLVSLKNNPEQFARR
LRRPVPFKPNTYAKRGTQFHQWLEDRFGATALLDEDQLPGMDEEESASTFAELKDSFLQS
RWSDRTPTFVEHPFEVVIGGHVIRGRMDAVFQEPDGTWLVVDWKTGQTPKGPEMAAAIIQ
LAVYRIAWASLRKIDSAQVRGAFHYVAHNHTFEPDHLPEVSELARLLDGE
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atggctaaggtttccccggtgctgttgtcccggatgctggggcaggaacatgcccccacc
gatcagcaggccgccatcatcggttccgaacccgggccgctactcgtggttgccggtgcc
ggtgcaggaaaaacagaaacgatggccgcccgtgtggtgtggttggtggccaatggtctg
gtcgccccggaccaggtcctcgggctcaccttcacccgtaaggctgcgcagcagctctcg
cagcgtatccgccaccggttggagaccctcgctggcatccccacgttgcgtgacatcgat
cccaccgggggcatcgcacgtgatctccaggcgatcacacccacggtgtccacctatgac
tcctatgcgggcagtctcatccgcgaatacggactgctattgcccgtggaaccatcggcc
cgtctgattacccagacggagctttatcacatcgcgagacaggtggtggacaactaccgg
ggtgaactcaccgccagccaatcacccgccacagtgacggaatacctgctcaagcttgtc
tcggagatggacaaccacatggtggatccggaggacatcgtcgatgagtcctggccgttc
atcaacctctttgatgagctgcccaaaggcccccggcagagggatgccctctcccagacg
atggtgggttggcgcgacacccagatcacccgcctccagtatctgcccctggtggaacag
ctcaaacaggaactccatgaccgggctgtgatcaccttcggcgaacagatgagcaaggcg
gcacgcctggcatccacgcatccacaggtggggtactcgcagcgtcgtcgcttccgggtg
gtcatgcttgatgagtaccaggacaccagccattcccagcgggtgctcctgcgcagtctc
ttcggcggaactgatccggggctgacggtcaatgcggtgggtgacccgatgcaggcgatc
tacggatggcggggggctacggctgcgaacctggagaacttcatcggtgatttccccaag
atctccctggagacccgcaccgatgcaccgaaacgcgaactgaccaccagctggcgtaat
ccgccggaggtgctggagttggcgaatgccgtatccgccgaagtccttggtccgggaccg
acccgcaccgttcaacctctgcagccacggcccggcgcaccgacaggtgaagtatcgatc
ggctggttcgccaccgcacaggaggaacggaccttcgtggctgatgagatcaagaagtac
tgggatgcccgcagtgagaaattcaccgccgcggtgctggtccgtaaacgtcgacattcc
gaaccgatggccgcggagctgcgcgcacggggcattccggtggagatcgtcggactgtcc
ggcctgctcgatgtgcctgaggtcgctgacatggtggcgatcgcgacgatgttggtccgt
ccgcaggacaaccgcgcgtcgcttcgcatcctggggggaccgcatgtgggcctgggtgtc
gccgatatccaggtgctgcagaaacgcgccgcgaatatcgcgggacgtgtccgttcctgg
gaggagaaactccagccggaggatccactggagaagctcgccgcccagatcgcagatacc
gtccctgcggaaccggaggagatcgtcggactggcggatgccgtatcggatctgggtgag
gccactgatttcagcgaggagggactgcggaggttgcgtcgactgtccgcccaactccgt
catctgaggacctcgagtctgggtaggtccgtggcggatatcttcgcggacatcgaggat
gtctttgggatccgcaccgaggtgctcgcccgtgagaacccccgggctgatggtgccgtg
ggaacggttcacctcgatcgtttcgccgatgaggtggcggcacattcgagtatcggtctg
cctgagctgcttgattacttccagttggcgcagaatcaggaggatggtctggaaccgggt
gaggtgacggtgcgcagtgatcgtgtgcagatcctcacggtgcacaaggcgaagggcctg
gagtgggatattgtgtccgttctccacgcggacgccggtacctatgatgcgaaggcatcg
acgtggttgaccaatgtcacggcggtgccctcgaccctgcgtggcgatgccggggagggt
accccggtgctggacacctcgggtgcggaggatcgtaaagaattggagaatgcctgtaag
gactatatcgctgaggttcgtgagggtctggcagaggagaattcacggctgttctatgtg
ggcatcacgcgcagtgaacgtgtgttgatggtgacgggttcggcgattgatggcaccacg
gtcaaacccaaatccccatattcccacctggagatcctgaagtccacggcgcctgatgcg
gtggtgacgtggtgggagggggatgaggcggacgtcgcaaagctgccccccgaggagggg
atctacccgcaggtggccgcatcggccggcatggctgagggggcggccctcgtgcgggcg
acgccggtggcggcgtcgcaggatggcggcctggaggagctgtgggaacgcgaggtgacg
gtgcttatcgacgaacaccaccgcctccaatcgcccaccctcgccgtggaaatctcccgt
gaactgaccgcaactgatctggtcagtctgaagaacaacccggagcagttcgcccggagg
ctacgccgacccgtgcccttcaaaccgaacacctacgccaaacgcggcacccagttccac
cagtggttggaggatcgtttcggcgccaccgccctgctggatgaggatcagctgcccggc
atggatgaggaggaatccgcgagcaccttcgctgaactcaaggactccttcctccaatcc
cggtggtcggatcgcacccccacttttgtggagcaccccttcgaggtggtcatcggcgga
cacgtgatccgcggacgcatggatgctgtgttccaggaacctgacggcacctggctggtg
gtggactggaagaccggacagaccccgaaaggcccggagatggccgccgcgatcatccag
ttggccgtataccgcatcgcgtgggcgagcctgcggaagatcgattcggcgcaggtccga
ggtgctttccattatgtggcacacaatcacacctttgaaccggaccatctacctgaagta
agtgaactcgcccgacttctggatggggagtaa
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