Corynebacterium faecale: CFAEC_04000
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Entry
CFAEC_04000 CDS
T09289
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cfac
Corynebacterium faecale
Pathway
cfac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CFAEC_04000 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfac03019
]
CFAEC_04000 (recQ)
03400 DNA repair and recombination proteins [BR:
cfac03400
]
CFAEC_04000 (recQ)
Enzymes [BR:
cfac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CFAEC_04000 (recQ)
Messenger RNA biogenesis [BR:
cfac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CFAEC_04000 (recQ)
DNA repair and recombination proteins [BR:
cfac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CFAEC_04000 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
HTH_Cmi2_C
Motif
Other DBs
NCBI-ProteinID:
WJY91648
LinkDB
All DBs
Position
857474..859525
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AA seq
683 aa
AA seq
DB search
MNATREEANQLLEGIAGPGAQLRDDQWLAIDALVNQKKRMLVVQRTGWGKSAVYFIAAKL
LRTRGAGAAVIISPLLALMRNQVSAAERAGIKAATLNSANMTDWDQIQRQVVGGEVDVLL
ISPERLNNPDFRDAVLPRLAAETGLVVVDEAHCISDWGHDFRPDYRRIRDLLAGLEPGVP
VLATTATANDRVVEDVRAQLGEDTGVLRGGLDRESLHLAVVNLPDSTARPAWIASHLKEL
EGSGIIYCLTVAAAHDLADALNAVGWNVAAYTGRTEAGERERLEHALINNEIKALVATSA
LGMGFDKPDLGFVVHLGAPGSPVSYYQQIGRAGRGTDRADVILLPGTEDKEIWEYFASVS
FPQEPVVRQLLSVLTGDVQSTIKLESQVDLSRSRLEQVLKVLDVDGAVKRVRGGWISTGA
EWTYDAQRYRGLEQARTDEQNSMIAYQRTDGCRMLYLRRELDDHTATDPCGRCDNCTGNY
WSTESDKTVTAEVGRQLSAPGMRVAARKQWPTGIGMKGKIKGIEEGRALGRLNDIGRGPA
LRELLDSGTFPEEPWMTRIIAVLADWDWSTRPANVVALGSTDAQATALIEQTAGAIARVG
RMNYAGVLPVAPGAVEVTAQNSAYRVSALLNQWDWSQGLNLVDGPILLVTDLIDTGWSVT
VAGSGIAERTGFNVLPFALASRG
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcgacgagagaagaagccaaccaactccttgaaggcatcgccggaccgggggcc
caattacgtgatgatcagtggttagccattgacgcacttgttaatcagaaaaagcgcatg
ctggtggtacagcgcacgggttggggtaaatcggcggtgtacttcattgccgccaaattg
ctgcgtacccggggtgccggtgccgcggtgatcatctccccgttgctggccctgatgcgc
aaccaggtctcagcagccgaacgtgcaggtattaaagccgccacacttaacagcgccaac
atgaccgactgggatcagatccagagacaggttgtcgggggagaagtggatgttctcctg
atctccccggaacgcctcaacaacccggatttccgtgatgccgtcctgccccgcctggcg
gcggaaaccggcctggtggtggtggatgaggcgcactgtatttccgactggggacatgat
ttccgccccgattaccggcgtatccgtgatctgctcgccggcctggaacccggcgttccg
gtgctggccaccactgcaaccgccaatgaccgcgtggtggaagacgtccgggcgcagctg
ggcgaagacaccggtgtgctccgcggcggtttggaccgtgaatccctccacctcgcggtg
gtgaaccttcctgattccacggcccgccccgcctggatcgccagtcatctgaaggagttg
gaaggctccggcatcatctattgtctcaccgtcgcagcagcccatgacctcgcggacgca
ctcaacgcagtgggctggaatgtggcagcctacaccggacgcaccgaggccggtgagcgt
gaacgccttgagcacgcgctgatcaataatgagatcaaggcactggtggccacctcggcg
ctgggcatgggttttgataaacccgatcttggatttgtggtgcacctcggcgcaccggga
tcaccggtgtcctattatcagcagatcggccgcgccgggcgtggcaccgatcgcgctgat
gtcatcctgctccccggtaccgaggacaaagagatctgggaatacttcgcctcggtatcc
ttcccacaggaaccagtggtccggcagttgctcagcgtgctcaccggggacgtccaatcc
accatcaagttggagtcacaggtggatctgtcccgttcccgcctggaacaggtgctcaag
gtactggacgtggatggtgcggtgaaacgggttcgtggtggttggatctccaccggagca
gagtggacctatgacgcgcaacgctaccgtggcctggagcaggcccgcactgatgaacaa
aacagcatgatcgcctaccagcgcactgatggttgccgcatgctctatctgcgccgggaa
cttgatgatcacaccgccaccgacccctgtgggcgctgtgacaactgcaccggaaactac
tggtccactgaatccgacaagaccgtgactgctgaagtgggcagacagctcagcgcaccg
ggcatgcgggtggcagccagaaaacagtggccgacgggcatcgggatgaaggggaagatc
aagggaatcgaggaagggcgtgcactgggtcgtctcaatgacatcggccgtggacccgcc
ctgcgtgagctcctggactccggcaccttccccgaggaaccgtggatgacacgcatcatc
gccgtgctggcggattgggactggagcacccgccccgccaatgtggtggccttgggcagt
accgatgcacaagccaccgccctgatagaacagaccgcgggcgccatcgcgcgcgtggga
cggatgaattacgcgggggtgttacctgtggcgccgggagcagttgaggtgacagcccag
aactccgcctaccgggtctctgcactgttgaaccagtgggactggtcgcagggattaaac
ctcgtggacggtccgattctcctggtcaccgatctcatcgacaccggttggtccgtgacc
gtggccggaagtggcatcgccgaacgcaccggtttcaacgtcctgcccttcgctctggct
agtcggggataa
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