Corynebacterium faecale: CFAEC_05760
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Entry
CFAEC_05760 CDS
T09289
Name
(GenBank) hypothetical protein
KO
K03628
transcription termination factor Rho
Organism
cfac
Corynebacterium faecale
Pathway
cfac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CFAEC_05760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfac03021
]
CFAEC_05760
03019 Messenger RNA biogenesis [BR:
cfac03019
]
CFAEC_05760
Transcription machinery [BR:
cfac03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CFAEC_05760
Messenger RNA biogenesis [BR:
cfac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CFAEC_05760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
Spore_III_AA
NACHT
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
WJY91989
LinkDB
All DBs
Position
1235137..1237296
Genome browser
AA seq
719 aa
AA seq
DB search
MTNTDNTAANQGELTALRLPELRKIAGELGLKGTSGLRKGELINAISSARSGGNTSTAAP
AANAPEEQQAAGTRARRAVKSTPAPAAETAPEEAPARRGRRRVTASPTTPSSEGVQQAPQ
TESAPAPMQEQSHEDNDGSESSSQDGQDNQDNRFESRSAARRARRNRQRQTQRDTPDSED
SQDTQDQQDTAPAQQTQQSQPSQPSQNEQEDNTEQSQGDDNQQDSHDNRRGNQRRDRRGN
RNDQRDNNRDNQRDNQQDQSDNQQDSQDNDGSHNDRRGNRNDDHGDDRRGRRGRRNRRGR
DNRQDNRDNRGDQQNDQNDNQQDDQLQNVAGILDIVDTNVAFVRTTGYHPAPSDVFVNNQ
LIRRMGLRSGDAIVGQVRMNQGGQQGGNQGGHGGRNRQKYNNLSRVDSINGLPVEETRNR
PEFNKLTPLYPNQRLRLETEQRVLTTRVIDLIMPIGKGQRALIVSPPKAGKTTILQNIAN
AIATNNPECYLMVVLVDERPEEVTDMQRSVKGEVIASTFDRPPGEHTAIAELAIERAKRL
VEQGQDVVVLLDSITRLGRAYNNSSPASGRILSGGVDSNALYPPKRFLGAARNIENGGSL
TIIATAMVETGSAGDTVIFEEFKGTGNAELKLDRKISERRVFPAVDVNPSGTRKDELLLN
PDEARIMHKLRRILSALDNQQAIDLLIKQLKKTKSNAEFLMQVASSAPMAATENDEEYS
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaacacagacaacaccgcagcgaaccagggcgaactgaccgcccttcgactgccg
gaactgcgcaagatcgccggagaactgggcctcaaggggacctccgggttgcgcaagggt
gaactgatcaacgccatcagctccgcccgttcgggtggaaacaccagcaccgccgccccg
gccgccaacgcgccagaggaacagcaggctgcaggcacccgcgcccgcagggccgtcaag
tccacccctgcacccgcagcagagactgctccggaagaggcgcccgctcgtcgtggccgt
cgccgcgtcaccgcctccccgaccactccctccagtgagggtgtccagcaggccccacag
actgagtccgctccagccccgatgcaggaacagtcccacgaggacaatgacggctctgag
tcctcatcccaggacggccaggataaccaggacaaccgctttgaatcccgctccgctgca
cgccgcgcgcgacgcaaccgccagcgccagacacagcgtgacaccccggactccgaggac
agtcaggacacccaggaccagcaggacaccgctccggcacagcagactcagcagtctcag
ccttctcagccttctcagaatgagcaggaggacaacaccgagcagtcccagggtgatgac
aaccagcaggattcccacgataaccgtcgtggcaaccagcgtcgtgaccgccgcggaaat
cgcaatgatcagcgggacaacaaccgtgacaaccagcgcgataaccagcaggatcagtcc
gacaatcagcaggattcccaggacaacgacggctcccacaatgatcgccgcggaaatcgc
aatgacgaccacggtgatgaccgccgtggccgccgtggccgccgtaaccgtcgtggccgg
gataaccgccaggacaaccgtgataaccgcggtgaccagcagaatgatcagaatgacaac
cagcaggacgatcagctgcagaacgtcgccggcatcctggacatcgtggacaccaatgtg
gcgttcgtccgcaccaccggttaccacccggcaccatctgatgtctttgtgaacaaccag
ctgatccgtcgcatgggtctgcgttccggtgacgccatcgtgggccaggtccgcatgaat
cagggtggacagcagggcggcaaccagggtggacatggtggacgcaaccgtcagaagtac
aacaacctgtcgcgcgtggacagcatcaacggcctgcctgttgaggaaacccgcaaccgt
ccggagttcaacaagctcaccccgctgtacccgaaccagcgtctgcgtctggaaaccgag
cagcgtgtcctgaccacccgtgtcattgacctgatcatgccgatcggcaagggccagcgt
gcgctcatcgtgtccccgcccaaggccggtaagaccacgatcctgcagaacatcgccaac
gcgatcgccaccaacaacccggagtgctacctcatggttgtgctggtggatgagcgtcct
gaggaagtcaccgatatgcagcgttcggtcaagggtgaggtcatcgcctccaccttcgac
cgcccgccgggagagcacaccgccattgcggagctggccattgagcgcgccaagcgtctg
gtggagcagggccaggacgttgttgtcctgctcgattcaatcacccgtctgggtcgtgcc
tacaacaacagttcccctgcgtccggacgtatcctgtccggtggtgttgactccaacgcg
ctgtacccgccgaagcgtttcctgggtgcggcccgcaacattgaaaatggtggttccctc
accatcatcgccaccgcgatggtggagaccggttccgccggtgacaccgtgatcttcgag
gagttcaagggcaccggtaacgccgagctcaagctggatcgtaagatctccgagcgtcgt
gtgttccctgcagtggatgtcaacccatccggtacccgtaaggatgagctgttgctcaac
ccggatgaggctcgcatcatgcacaagcttcgtcgtatcctgtctgcactggataaccag
caggccattgatctgctgatcaagcagctgaagaagaccaagtccaacgcggaattcctc
atgcaggtcgcttcaagtgcaccgatggccgccaccgaaaatgatgaggagtactcataa
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