Corynebacterium faecale: CFAEC_06390
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Entry
CFAEC_06390 CDS
T09289
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cfac
Corynebacterium faecale
Pathway
cfac03030
DNA replication
cfac03410
Base excision repair
cfac03420
Nucleotide excision repair
cfac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cfac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CFAEC_06390 (polA)
03410 Base excision repair
CFAEC_06390 (polA)
03420 Nucleotide excision repair
CFAEC_06390 (polA)
03440 Homologous recombination
CFAEC_06390 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cfac03032
]
CFAEC_06390 (polA)
03400 DNA repair and recombination proteins [BR:
cfac03400
]
CFAEC_06390 (polA)
Enzymes [BR:
cfac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CFAEC_06390 (polA)
DNA replication proteins [BR:
cfac03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CFAEC_06390 (polA)
DNA repair and recombination proteins [BR:
cfac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CFAEC_06390 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CFAEC_06390 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_2
DNA_pol_lambd_f
HHH_5
Motif
Other DBs
NCBI-ProteinID:
WJY92108
LinkDB
All DBs
Position
1358879..1361608
Genome browser
AA seq
909 aa
AA seq
DB search
MRMCHLKTLWPRLDCVTEKTDLTDQTLMLIDGHSMAFRAFFALPAENFSTTGGQNTNAVY
GFLSMLATLLKEHQPSHVAVAFDVGRKTFRTDLFPAYKAQREATPPEFKGQVEILKGVLK
TLGISTIEMEDFEADDVIATLAVQAKPLGFDTLIVTGDRDSFQLVNDTTTVLYPMRGVSV
LHRFTPEAVEEKYGLTPQQYPDFAALRGDPSDNLPNIPGVGEKTATKWITEYGSLDNLLE
NAEKIKGKVGDNFRERLDQVKMNRTLTEMIKDMDLPLGPTDMEMQPASVAEVAAEFDTLE
FGSNLRERVLAAVKTEGELPAVEITPQDEVIVDTQHLDEWLETRKDQVLALAITGVGTPA
TGDAHSVAIVDTHRHAVVADLADITPEAERALAQWLADDRAPKLLHGAKAAFHMLAGRGF
ELKGIEHDTAIAAYLLRPGQRTYELADVYQRHLQRQLKSADNDSRQLTLLDAGDTQALVD
EAVAIFELSEELTRQLQEINAFELYRDLEIPLLSILARMESIGIAVNVQTLEDQLETFID
QVRNEEEAARELAGDPSLNLSSPKQLQVVLFETFGMPKTKKTKTGYSTAAAEIEALAVKS
PHPFLDHLLAHRQYQKMKTTLEGLIREVGSDGRIHTTFNQTVASTGRLSSTDPNLQNIPV
RTEAGRKIRSGFVVGEGFETLLTADYSQIEMRVMAHLSQDPGLIDAYQQGEDLHNYVGSK
VFDVPIDGVTPELRRRVKAMSYGLVYGLSAFGLSQQLGIPAGEAKAIMENYFERFGGVKR
YLAEVVEQSRKTGYTETLFGRRRYLPELTSDNRVARENAERAALNAPIQGTAADIIKVAM
IRVDRELEAANVTSRVLLQVHDELVVEIAPGELEQVREIVEREMDSAISLLVPLEVSAGS
GGDWDTAAH
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatgtgccacctgaaaacactctggcctagactcgactgcgtgactgagaagact
gacctgaccgaccagaccctgatgctcatcgatggccactcgatggcttttcgtgctttc
ttcgcgcttcccgcggagaatttctccaccaccggtggtcagaacacgaatgcggtgtat
ggctttctctcgatgctggccacgctgctcaaggagcaccagccctcccatgtggcggtg
gccttcgatgtggggcgcaagacgttccggacggatctgtttccggcgtataaggcgcag
cgtgaggcaacgccgcctgagttcaaggggcaggtggagattctcaagggtgtgctgaaa
actctcggcatctccaccattgagatggaggacttcgaggcggatgatgtcatcgccacg
ctggccgttcaggcgaagccgctgggttttgacaccctcattgtcacgggtgaccgtgat
tccttccagctggtcaatgacaccaccaccgtgttgtatccgatgcgtggtgtctctgtg
ctgcaccgtttcaccccggaggcggtggaggagaagtacggactgaccccgcagcagtac
ccggactttgcggcgctgcgtggagacccttccgataacctccccaatatcccgggtgtg
ggggagaagaccgccaccaagtggatcacggagtatggctccctggataacctcctggag
aatgccgaaaagatcaagggcaaggtcggtgataacttccgggagcgtcttgatcaggtg
aagatgaaccgcacgctcaccgagatgatcaaggatatggatctgccgctcggacccacg
gatatggagatgcagcccgcaagtgttgcagaggtggcagcggagttcgacaccctggaa
ttcggctccaacctgcgtgagcgggtgctggccgcggtgaaaaccgagggggagctcccg
gcagtggaaatcaccccgcaggatgaggtgatcgtggatacccagcacctcgatgaatgg
ctggaaactcgcaaggatcaagtactggcccttgccatcacgggtgtgggtacccctgca
acaggtgacgcgcactcggtggccattgtggatacccaccgacatgctgtggttgcagac
ctcgccgatatcaccccggaagccgaacgtgcacttgcgcagtggctcgctgatgaccgc
gccccgaagctccttcacggcgcgaaggccgccttccacatgctcgctggccgcggtttc
gagctcaagggcatcgagcatgacaccgcgatcgctgcttatctcttgcgtccaggtcag
cgcacctatgagttggctgatgtctaccagcgtcacctgcagcgtcaactgaaatccgcg
gacaatgacagccgccagctcaccctcctggacgccggtgacacccaggcgctggtggat
gaagccgtggccatctttgagctgtctgaggaactgacccgtcagctccaggagatcaat
gctttcgagctctaccgtgaccttgagattccgttgttgagcattctggcacgtatggaa
tccatcggcatcgcggtgaacgtgcagacgctggaagaccagctggagaccttcattgat
caggtcaggaatgaggaggaggcagcgcgtgaactcgccggcgatccgagcctcaacctc
tccagcccgaagcagctgcaggtcgtgcttttcgagaccttcggcatgcccaagaccaag
aagaccaagaccggttattccaccgccgccgctgagatcgaggcgctggctgtgaagagt
ccacacccgttcctggatcacctcctggcacaccgccagtaccagaagatgaaaaccacc
ctggagggtctgatccgtgaggtgggttccgatggtcggatccacaccaccttcaaccag
accgtggcgtccaccggcaggctttcctccaccgaccccaacctgcagaacatccccgtg
cgcaccgaggccgggcgcaagatccgttccggtttcgtggtgggcgagggttttgagacc
ctcctcaccgctgactattcccagatcgagatgcgtgtgatggcgcacctctcccaggac
ccgggtctgattgatgcgtatcagcagggcgaggacctgcacaattacgtcggctccaag
gttttcgacgtgccgatcgacggcgtcaccccggagctgcgccgccgcgtcaaggccatg
tcctacggcctggtctacgggctctcagcgttcggcctctcccagcagctgggcatcccg
gcaggcgaggcgaaggcgatcatggagaactacttcgagcgcttcggcggtgtcaaacgc
tacctggctgaggtggtcgagcagtcccgcaagaccggttataccgagacgttgtttggt
cgccgccgctacctgcctgagctcacctccgataaccgggtggcccgcgagaacgctgag
cgcgctgccctcaacgcgccgatccagggcacagccgcggacatcatcaaggtggccatg
atccgcgttgaccgcgaacttgaggccgcgaacgtgacctcgcgggtgctgctccaggtc
cacgatgagctcgtggtcgagatcgcccccggcgagttggagcaggtccgggagatcgtc
gagcgcgagatggacagcgccatctcactgttggtgccactcgaggtctccgccggcagc
ggcggcgattgggatacggccgcgcactag
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