Corynebacterium faecale: CFAEC_08440
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Entry
CFAEC_08440 CDS
T09289
Name
(GenBank) Putative ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
cfac
Corynebacterium faecale
Pathway
cfac03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfac00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CFAEC_08440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfac03019
]
CFAEC_08440
Messenger RNA biogenesis [BR:
cfac03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CFAEC_08440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
WJY92505
LinkDB
All DBs
Position
complement(1820118..1822223)
Genome browser
AA seq
701 aa
AA seq
DB search
MNESRNRARKVTRKAGPPEAGQEAVADTPVFQAPEASAAQETDKAPASGNDNRDSNGSDS
SSNRGGNNSGRGRSSSNSRGGRSRRGGGNQGQDGQGNRGQRNPAQRNQGGRRNVVKSMQG
ADLTQRLPDPPKAPSNGLRIYALGGISEIGRNMTVFEYNNRLLIVDCGVLFPSSGEPGVD
LILPDFGPIENNLDRVEALVVTHGHEDHIGAIPWLLKLRSDIPIIGSRFTLALIAAKCKE
HRLRPKLIEVNEQSNENRGPFNIRFWAVNHSIPDCLGLAIKTPAGLVIHTGDIKLDQTPT
DGRPTDLPALSRFGDEGVDLMLCDSTNATTPGVSGSEAEIAPTLKRLVTEAKQRVILASF
ASNVYRVQAAVDAAVAAGRKVAFNGRSMIRNMEIAEKMGYLKAPRGTIVSMDDASRMAPH
KVMLITTGTQGEPMAALSRMARREHRQITVRDGDLIILSSSLVPGNEEAVFGVINMLAQI
GATVITGRDAKVHTSGHAYSGELLFLYNAARPKNAMPVHGEWRHLRANKELAISTGVQRD
NVVLAQNGVVVDLVNGHAKVVGQIPVGNLYVDGVTMGDIDADILADRTSLGEGGLISITC
VIDNRTGRLLESPRVETTGFSEDSKAMMTEVTELAENTMNDLAAEGENDPYRMVQQMRRK
LSRFVEQKWKRQPVIMPTVIPMTSDNVSINDDEVRASRESL
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaatcccgtaatcgcgcccggaaggtcacccgcaaggcgggtccgccggaggct
ggacaggaagcggtagcggacaccccggtgttccaggctcctgaggcatcagccgcccaa
gaaacggacaaagcacctgcctccggaaacgacaaccgggactccaacgggtccgactcg
tcgtcgaaccggggcggtaacaactccggccgtggacgttcctcgtccaacagccgtggt
ggacgtagccgccgtggtggaggcaaccagggccaggacggtcagggtaaccgtggtcag
cgtaacccggctcagcgtaaccagggtggtcgccgcaatgtggtcaagtccatgcagggc
gcggacctgacccagcgtctgcccgacccaccgaaggctccatccaacgggctgcgtatc
tacgcactgggtggtatttccgagatcggtcgcaacatgaccgtgttcgaatacaacaac
cgtcttctcatcgttgactgtggtgtgctgttcccgtcatcaggcgaacctggcgtggat
ttgatcctgccggacttcggtccgatcgagaacaacctcgaccgcgttgaggcactcgtg
gtcacccacgggcatgaggaccacatcggagcgatcccgtggctgctcaagctgcgcagt
gacatccccatcatcggatcccgtttcacactcgcgctcatcgcagccaagtgcaaggag
caccgactgcgtccgaagctgatcgaggtcaacgagcagtccaatgagaaccgcggaccg
ttcaacattcgcttctgggcagtcaaccactccatcccagactgcctgggcctcgccatc
aagacccctgccggacttgtcatccacaccggtgacatcaagctggatcagaccccaacc
gatggtcgtccaaccgacctgccggcactgtcccggttcggtgacgaaggcgtcgacctg
atgctgtgtgactccaccaacgcaaccaccccgggcgtatcaggttccgaggcggagatc
gccccgacgctgaagcgtctggtcactgaagccaagcagcgcgtcatcctcgcctccttc
gcctcaaacgtctaccgtgtccaggctgctgtcgatgccgctgtcgcagcaggtcgcaag
gtggctttcaacggtcgctccatgatccggaacatggagatcgccgagaagatgggctac
ctcaaggcaccacgcggaacgatcgtctccatggacgatgcctcccgcatggcaccgcac
aaggtcatgctcatcaccaccggcacccagggtgagcccatggcggcgttgtcccggatg
gcacgccgtgaacaccgtcagatcaccgtccgcgacggcgacctgatcatcctgtcctcc
tcgctcgttccgggtaatgaggaagctgtcttcggtgtgatcaacatgctggcccagatc
ggcgcaaccgtgatcacaggccgcgacgccaaggtgcacacctctggccacgcatactca
ggcgagctgctgttcctgtacaacgctgcgcgcccgaagaacgccatgcctgtgcacggc
gagtggcgtcacctgcgtgccaacaaggaactggcgatctccaccggtgtgcagcgcgac
aacgtcgtgctcgcacagaatggtgtagtcgttgacctggtcaacggacatgccaaggtt
gtgggtcagattccagtcggtaacctctatgtcgatggtgtcaccatgggtgatatcgat
gcagacatcctggcggaccgtacctccctcggcgagggtggactgatctccatcacgtgt
gtcatcgacaaccgcacgggtcgactccttgagagcccacgggttgaaaccactggtttc
tccgaggattccaaggcaatgatgactgaggtcaccgagctggctgagaacactatgaac
gatcttgccgccgaaggtgaaaacgatccttaccgcatggttcagcagatgcgtcgtaag
ctttcccgtttcgtggagcagaagtggaagcgccagccggtcatcatgcctaccgtcatc
ccgatgacctcggataacgtgagcattaatgatgatgaggttcgtgcctccagggaatcc
ctctaa
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