Corynebacterium faecale: CFAEC_08965
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Entry
CFAEC_08965 CDS
T09289
Symbol
fpg1
Name
(GenBank) Formamidopyrimidine-DNA glycosylase 1
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cfac
Corynebacterium faecale
Pathway
cfac03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cfac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CFAEC_08965 (fpg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfac03400
]
CFAEC_08965 (fpg1)
Enzymes [BR:
cfac01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CFAEC_08965 (fpg1)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CFAEC_08965 (fpg1)
DNA repair and recombination proteins [BR:
cfac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CFAEC_08965 (fpg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
WJY92610
LinkDB
All DBs
Position
complement(1938597..1939454)
Genome browser
AA seq
285 aa
AA seq
DB search
MPELPEVEVVRLGLDSHLVGRTIVSASVLYPRAARNQVGGGREIEANLTGLKVSAARRRG
KFLWLELDEPTDATPTGLALLVHLGMSGQMLVKSPDAEPNRHLRARIELDDANEVWFVDQ
RTFGYWWLGELVDGVPARLSHIAPDLLEEGIDIPALAATLKSKNTEIKRLLLNQEIVSGI
GNIYADEMLWEAGIHPRQQASRVSLKRLTALLETGREVMLRALDQGGTSFDALYVNVNGN
SGYFSLSLNAYGQTGKPCARCANPITRETFMNRGSHFCNRCQKVF
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
gtgccggaactccctgaagttgaggttgtccgtctcggattggacagccacctggtgggg
cgcaccatcgtgagcgcctccgtgctctatccacgtgccgccaggaaccaggtcggcggc
gggcgggagatcgaggctaatctcaccggcttgaaggtcagtgcggcccggcggcgggga
aaatttctgtggctggaactcgatgagcccaccgacgccaccccgacgggattggcgctg
ctggtccaccttggcatgagtggacagatgctggtcaagtcccccgacgcggagcccaac
cggcacctgcgcgcgcggattgagcttgacgacgccaatgaggtctggttcgttgaccag
cgaaccttcgggtactggtggctcggtgagcttgtcgacggtgtccctgccaggctttcg
cacatcgccccggatctgctcgaagagggtattgacatacccgcactcgcagccaccctc
aaaagcaagaacacagaaatcaaacgcctcctgctcaaccaggagattgtctccggaatc
ggaaatatctacgccgatgaaatgctgtgggaggcggggatccatccacggcagcaggct
tccagagtatcgctgaagcggttgacggcactgctggaaaccggccgtgaggtgatgctc
cgggccttggatcagggcgggacgagttttgatgcactctatgtcaacgtcaacggcaac
tccggatatttctccctgtccctcaatgcctatgggcagacggggaaaccgtgtgcacgc
tgcgcaaacccgatcactcgtgaaacattcatgaaccggggaagccacttctgcaatcga
tgccagaaagtgttttaa
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