Kaistella faecalis: LL667_02230
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Entry
LL667_02230 CDS
T08247
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cfae
Kaistella faecalis
Pathway
cfae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LL667_02230 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfae03019
]
LL667_02230 (recQ)
03400 DNA repair and recombination proteins [BR:
cfae03400
]
LL667_02230 (recQ)
Enzymes [BR:
cfae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LL667_02230 (recQ)
Messenger RNA biogenesis [BR:
cfae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LL667_02230 (recQ)
DNA repair and recombination proteins [BR:
cfae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LL667_02230 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ-1-like_HTH
RQC
HRDC
RecQ_Zn_bind
ResIII
HTH_40
Motif
Other DBs
NCBI-ProteinID:
UFK98186
LinkDB
All DBs
Position
complement(465060..467264)
Genome browser
AA seq
734 aa
AA seq
DB search
MKTKTADLSKELKKYFGFSTFKGQQESIIKNLLEGKDIFVLMPTGGGKSLCYQLPALISE
GTAIVVSPLIALMKNQVDAVNGLSSDPGVAHVLNSSLNKTQTKQVFDDIRAGRTKLLYVA
PESLIKEEYLDFLKEVKISFVAIDEAHCISEWGHDFRPEYRNLKLIIDKIADVPVIALTA
TATPKVQDDIQKTLGMSNALVFKESFNRPNLFYEVRPKVNIDKEIVKFINQHKGKSGIVY
CLSRRKVEEFAQLLQVNGIDALPYHAGLDQKTRVMNQDKFLMEECDVIVATIAFGMGIDK
PDVRFVIHYDIPKSLESYYQETGRAGRDGGEGICLAFYDPKDIEKLEKFLAQKPVSEREI
GLQLLNEVVGYAETSMSRRQYILYYFGEQFDPVSGAGAQMCDNSVNPPKLKDATKELKLV
LKLVKDLEEKFKTKDLISVIVGKENSVTKSYKLETTKHFGIGRNQAENFWKSIIRQATVQ
DYLQKDIETYGVLKVTEKGLKAIEGKDKNTFLIAEDREYDLAQTKADSQQVQVQQNSGLD
ENLFVQLKELRKSVAKKHGIPPYTVFMDPSLEDMTVQYPVTVDEIGKTYGVGEGKAKKYG
KEFADFIRKYVAENGIERTQDMVIKQVANKSSHKVFIIQSTDKKIDLEDIAKAKNLSMED
LLKEMERIVYQGTKLNIDYYVDENFDEDIVEEFMEFMRGSDSDSMKVLLAEFGDDLSDEE
VRMLRIKFISDVAN
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaaaaactgccgatttatcgaaagaactcaaaaaatatttcggcttctctaca
tttaaaggtcagcaggaatcaattataaagaatttactggaaggcaaagatattttcgta
cttatgcccactggcggcgggaaatctctttgttaccaacttcctgctttaatttctgaa
ggaactgcgattgtagtttctccgttgattgcgctgatgaaaaatcaggttgatgccgtt
aacggactttcctcagatcccggcgtagcccatgtgttaaattcctcactcaataaaacc
cagaccaaacaggtttttgatgatatcagggcgggtcgcaccaaacttttatatgtagct
ccagaatcactgattaaggaagaatatcttgattttctgaaagaggttaaaatttcattc
gtagccattgatgaggcgcactgtatctccgaatggggacatgatttccgaccggaatac
cgtaatcttaagctgatcatcgataaaatagcagacgttcctgtgattgctttaacagcg
actgcaacgccaaaagttcaggatgatatccagaagactctgggaatgtcgaatgcattg
gtttttaaagaaagcttcaacaggccaaatcttttctatgaagttcgcccgaaagtgaat
attgataaagaaatcgtaaaattcatcaatcagcataaaggaaaatcaggaattgtttac
tgcctgagccggagaaaagtagaagaatttgctcagttactccaggttaacggaatcgat
gctttaccctaccacgccggactcgatcagaaaacccgtgtaatgaatcaggataaattc
ctgatggaagaatgcgatgtaatcgttgccacgattgctttcggaatgggaatcgacaag
ccggatgttaggtttgtgattcattacgatattccgaaatctcttgaaagttattatcag
gaaaccggaagagctggaagagatggaggtgaaggaatttgcttggcattttacgatccg
aaagatatcgaaaaactagaaaaattccttgcgcagaaacccgtttctgagcgcgaaatc
ggtcttcaactcctgaatgaagtagttggctatgcggaaacttccatgagccggcgacaa
tatattttatactattttggggagcagtttgatcctgtaagtggtgcaggtgcgcaaatg
tgcgacaattctgtaaatccacccaagctgaaagatgccaccaaagaactaaagctggta
ttgaaacttgtaaaggaccttgaggaaaaattcaaaaccaaagatttgatttccgtgatt
gtgggaaaagaaaattcggtcaccaaatcctataaattagaaactaccaaacatttcgga
attggcagaaaccaagctgaaaatttctggaaatccattatccggcaggcaaccgtacag
gattatcttcagaaagatattgaaacctatggcgttcttaaagtaacagaaaaaggcctt
aaggctattgaaggaaaagataaaaatacattccttattgctgaagaccgcgaatatgat
cttgcccagactaaagcagattcccagcaggttcaggtacagcaaaacagcggtttagac
gaaaatctttttgttcagctgaaagaattgcggaaatctgtggctaaaaaacatgggatt
ccgccttacaccgtttttatggatccaagtttggaggatatgacggtacagtatccggtt
acggttgatgaaatcggaaaaacttacggagttggtgaaggaaaagccaaaaaatacgga
aaagaattcgcggattttatcaggaaatatgtcgcggagaacggtatcgagcgaactcag
gacatggttatcaagcaggtagccaataaatccagccataaagtattcatcattcagagt
accgataaaaaaattgatctggaggatattgcgaaagcaaaaaatctttcgatggaggat
ttgctaaaggaaatggaacgtattgtttatcagggaactaaacttaatattgattattac
gtcgatgaaaatttcgatgaagatattgtggaagaattcatggaattcatgcgcggatcg
gacagtgacagtatgaaagtgcttctggcagaattcggtgatgatttaagcgatgaggaa
gttcggatgctaagaatcaaattcatcagcgatgtcgctaactaa
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