Kaistella faecalis: LL667_04815
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Entry
LL667_04815 CDS
T08247
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
cfae
Kaistella faecalis
Brite
KEGG Orthology (KO) [BR:
cfae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cfae03009
]
LL667_04815 (rlmD)
Enzymes [BR:
cfae01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
LL667_04815 (rlmD)
Ribosome biogenesis [BR:
cfae03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LL667_04815 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
TRAM
Cons_hypoth95
Methyltransf_11
MTS
TRM5-TYW2_MTfase
Methyltransf_15
N6_N4_Mtase
RrnaAD
PCMT
PrmA
Methyltransf_4
UPF0020
2-ph_phosp
NpmA
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
UFK98682
LinkDB
All DBs
Position
complement(1005158..1006567)
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AA seq
469 aa
AA seq
DB search
MRRKSKNIVLENIKLVSAGAKGVAVGRTEEGKTVLVTGAVPGDVVNARVKKSKSKYFEAE
VAEIIEKSPFRVEPKCIHFGVCGGCKWQNLAYEKQLDFKQDEVFNHIKRIGGFEDFETQP
ILGSTEEYFYRNKMEFSFSNARWLTQYEISSEENFGNRDALGFHIPGMWSKILDLKECWL
QEDPSNFIRLAVKEYAVANGLEFFDVKEQTGFLRTLMLRQNSKGEWMVLFQLFRDDKENR
EKLFDFLLNEFPQIKTLVYCINSKQNDSIYDQHVVTYFGEGFLMEEMDGLHFKIGPKSFF
QTNYKQALELYRKTLEFADLKGDEVVYDLYTGTGTIAQYVARNAKQVIGIESVQEAINAA
KEHAKLNGLSNCTFYCGDMKDIFNDDFLANHPKADVLITDPPRDGMHQKVVEQILKLSPE
KIVYVSCNSATQARDMALMKEHYRLVKILPVDMFPQTHHVENIALLVKI
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgagaaggaaaagtaaaaacattgttttagaaaatataaaactggtttcagcaggagca
aaaggcgttgcagtaggcagaaccgaagaaggtaaaaccgttctggttacgggcgctgtt
ccgggtgatgtggtaaatgcccgcgtaaaaaaatcaaaatcaaagtattttgaagctgag
gttgccgaaattattgaaaaatcacctttcagagttgagccgaaatgtatccacttcggg
gtttgtggcggctgcaaatggcagaatctagcctacgaaaaacagctcgatttcaaacag
gacgaagttttcaaccacatcaaaagaatcggcggatttgaggatttcgaaacgcagccg
attttaggaagcaccgaagagtatttctaccgcaataaaatggagttttccttttcaaat
gcacgttggttaactcagtatgaaatctcttccgaagagaatttcggaaaccgcgacgct
ttaggatttcatattccggggatgtggagcaaaattctcgatttaaaggaatgctggctt
caggaagatccttcaaatttcataagacttgctgtaaaagagtatgccgtagcaaacgga
cttgagtttttcgatgtgaaagaacagaccggttttttacggactttaatgttgcgccaa
aactcaaaaggggagtggatggttctcttccagcttttccgtgatgataaagaaaaccgc
gaaaaattattcgatttcttactcaatgaatttccgcagattaaaactttggtgtactgc
atcaattcaaagcagaacgattccatttacgatcagcatgtcgtaacctatttcggggaa
ggatttttaatggaggaaatggatggtctgcactttaaaatcggaccgaaatctttcttc
cagacgaattataagcaggcattggaactttatagaaaaactttggaatttgctgatctg
aaaggtgatgaggtggtttacgatctttatacaggaaccggaacaatcgcacaatacgtt
gccagaaatgcaaaacaggtcatcggcatcgaatcggttcaggaagcgattaatgcagcg
aaagaacacgccaaactcaacggactttctaactgtactttctactgtggcgatatgaaa
gacattttcaatgatgattttcttgccaaccatccgaaagctgatgtcctgattactgat
ccgcctcgcgacggaatgcaccagaaagtggtagagcaaattcttaagctttcccctgaa
aaaattgtttacgttagctgtaattcggcgacacaggccagggatatggcgctgatgaaa
gagcattaccgattggtgaaaattcttcctgtagatatgttcccccagacgcatcatgtg
gaaaatattgcgctattggtaaagatttaa
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