Kaistella faecalis: LL667_05310
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Entry
LL667_05310 CDS
T08247
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
cfae
Kaistella faecalis
Pathway
cfae03410
Base excision repair
cfae03430
Mismatch repair
cfae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cfae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LL667_05310 (recJ)
03430 Mismatch repair
LL667_05310 (recJ)
03440 Homologous recombination
LL667_05310 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfae03400
]
LL667_05310 (recJ)
DNA repair and recombination proteins [BR:
cfae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LL667_05310 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LL667_05310 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LL667_05310 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
DSPc
Motif
Other DBs
NCBI-ProteinID:
UFK98777
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All DBs
Position
1103995..1105704
Genome browser
AA seq
569 aa
AA seq
DB search
MSQKWIYKPEPDEDIVDGISSSLGFGTFESKILVLRGIDNYQKAREFFKPNLNDIHNPFL
MKDMQLAVDRIATAIENGEKILVYGDYDVDGTTAVALMYLYLSKIVDKKYLDFYIPDRNS
EGYGISTEGIDFAKENGFSIIIALDCGIKAIDKIEYAKERGVDFIICDHHLPGEEIPKAV
AVLDPKRNDCRYPFKELSGCGVGFKLCQGLNTIYKIPEAELFELTDLLAISIAADIVSMT
GENRVLAKQGLKVLRKSRNLGLRMLIPEDKLATFEISNIVFEIAPKINAAGRISHGKAAV
ELMVSDNLKQAQQIVNDIITLNDSRREMDMSSTTEALLQVEETGQLQNFTTVVYGSSWNK
GVIGIVASRLIETYYKPTLVFTDGNNGEMVASARSVADFDVHDALENCSEFFLKFGGHPA
AAGLSMEKAKFELFREKFEKIVAEKIQEHQKEPSIKIDSVVQIDDLNKDFFNFHRKLAPF
GPHNMKPVLVLKNQKVAGYVKTMGKDNSHIKFYIRQESSGRNIECVGFKLGKYAEEFREK
SFDIAFTAEENHWKGNITYYLNIRDVKFN
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaaaagtggatatacaaacctgaaccagatgaagatattgttgatggaataagc
tcctcgcttggttttggcacgtttgaatccaaaattctcgttctcagaggaattgataac
tatcaaaaagcaagggaattttttaaacccaacctcaacgatattcacaatcctttcctc
atgaaagacatgcagcttgctgtagaccgtattgcgacagcaattgaaaatggcgaaaaa
attttggtctacggcgattatgatgttgacggaaccaccgctgttgcgctcatgtacctt
tacctcagcaagattgtagataaaaaatatctcgatttttacattcccgacagaaattct
gaagggtacggaatttccacagaaggaatcgatttcgcaaaagaaaatggtttctctata
attattgcgctggattgtggcattaaagcaatcgataaaattgaatatgctaaagaacgc
ggagtggattttattatctgcgaccatcatttacctggagaagaaattccaaaggcagta
gctgttctcgatcctaaaagaaatgactgcagatatccattcaaggaactttcaggatgt
ggagttggctttaaactttgtcagggattaaataccatttataagattcccgaggcagaa
ctttttgaacttacagatttacttgcaatttctatcgcagcagatattgtttctatgacc
ggagaaaaccgggtgttggcaaaacagggactgaaagtattgcgcaaatcccgtaattta
ggattaagaatgctgatcccggaagacaaattggccacttttgaaatttccaatattgtt
tttgaaattgctcccaaaataaatgctgccggaagaatttcacacgggaaagctgcggtt
gaactgatggtatcagacaatctgaaacaggctcagcaaatagtgaacgatatcattaca
ttgaatgattcgcgccgcgaaatggatatgagcagcacaaccgaggcccttttacaggtc
gaggaaaccggccagcttcagaatttcacgacggtagtctatggttcaagctggaacaaa
ggcgttatcggaatcgtagcttccagacttattgaaacttattacaagcccactttggtt
tttaccgatgggaataacggcgaaatggtggcgtcagcaagatctgttgctgattttgac
gtgcatgatgcactcgaaaactgctctgagtttttcctgaaattcggcggacatcctgca
gctgccggactttcaatggaaaaagccaaattcgaactcttcagggaaaagttcgaaaaa
atagttgccgaaaaaattcaggaacatcaaaaagaacccagtataaaaattgattcagtt
gtgcagatcgatgacctcaacaaggatttctttaactttcacagaaaactggcaccattc
ggacctcacaatatgaaacctgttttagtcttgaaaaaccaaaaagttgccggctacgtc
aaaacaatgggtaaagacaacagtcacattaaattctacatccgccaggaatcatcgggt
agaaatatcgaatgcgtaggctttaaacttggaaaatatgctgaagagttcagggagaaa
tcgtttgatatcgcattcaccgcagaagaaaatcactggaaaggcaatattacctactac
ctgaatatccgtgacgtgaagttcaactaa
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