Kaistella faecalis: LL667_05990
Help
Entry
LL667_05990 CDS
T08247
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cfae
Kaistella faecalis
Pathway
cfae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LL667_05990 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfae03021
]
LL667_05990 (rho)
03019 Messenger RNA biogenesis [BR:
cfae03019
]
LL667_05990 (rho)
Transcription machinery [BR:
cfae03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
LL667_05990 (rho)
Messenger RNA biogenesis [BR:
cfae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LL667_05990 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
NACHT
AAA_25
AAA_22
Rho_N
Mor
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
UFK98903
LinkDB
All DBs
Position
complement(1253796..1255637)
Genome browser
AA seq
613 aa
AA seq
DB search
MFNIETLRSKSESELTKITKDLGVKLAKNSTDNDKIFAILDFQASNTKIAKDYFNATETT
MNTEEKPAPAPKKPVAKKPAAKKKVEKPAEVSVEIPFEKAETPAETPQEKPSEIQESTPV
EANKDSENNRNQQKKKRQRVAAPKEEAATETVVAEAAVETEAKAEQAKNQNPSQNQNPNQ
NPNQNPNQNGNGNGNGNKNPNQNRPQHPNQKNQNKNPNQNPNQNRNQQNSENQEENSKKD
FNFDGLVTIEGVLEILPDNYGFLRSSDFSYISSPDDVYVSTNQIRNYALKTGDTVRGIVR
LPKEGEKYFSLLKPTEVNGRDLEFIKDRVAFEFLTPLFPEEKFNLTGKNSTLSTRIVDLF
TPIGKGQRAMIVAQPKTGKTMLLKDIANSISENHPEAYMMILLIDERPEEVTDMERSVNA
EVIASTFDEPADKHVKVANLVLSKAQRMVECGHDVVILLDSITRLARAYNTVTPASGKIL
SGGVDANALHKPKRFFGAARNIEGGGSLTIIATALIDTGSKMDEVIFEEFKGTGNMELQL
DRKIANKRIYPAIDLVSSSTRRDDLLLDETTQQRMWILRKYLADMNPVEAMEFVNKSIKG
TLNNEEFLMSMNR
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacattgaaacgttacggtcaaaatccgaatcggagttgactaaaatcacgaaa
gatttaggcgttaaacttgctaaaaacagcacggataatgataaaatctttgcaatcctt
gattttcaggcttcaaataccaaaattgcaaaagattacttcaacgccactgaaactact
atgaatacagaagaaaaaccagctcctgcacctaaaaaaccggttgcaaagaaaccagcc
gccaaaaagaaagtggagaaacccgctgaagtttccgtagaaattccgtttgaaaaagca
gaaacacctgctgagactccgcaggaaaaaccttctgaaattcaagaatcaacgccagtt
gaagccaataaagattccgaaaacaaccgcaatcagcaaaagaaaaaaagacagcgtgtt
gccgctccgaaagaggaggctgcaactgaaactgtagttgcagaggctgcggtagaaact
gaagcaaaagctgagcaggctaaaaatcaaaatccgagccagaatcagaatccaaaccag
aatccaaaccagaaccctaatcagaacggaaatggcaatggaaacggaaataaaaatcca
aatcaaaacaggccccagcacccgaatcagaagaatcagaacaaaaacccaaatcaaaat
ccaaatcagaaccgcaatcagcaaaattctgaaaatcaggaagaaaactctaagaaagac
tttaatttcgatggattagtaacgattgagggtgttctcgagattcttccggataactac
ggattcctccgttcctcagatttctcctacatttcttcaccggatgatgtgtatgtttca
accaatcagatcaggaattatgcattgaaaacaggcgataccgttcggggaattgtccgt
ttgccaaaagaaggcgaaaaatatttctccttactgaaaccaacagaagttaacggccgg
gatttagaattcattaaagaccgcgttgcattcgaattccttacgccgttgttccctgaa
gaaaaattcaatttaacagggaaaaactctacactttctacaagaattgttgatctcttc
actccgataggaaaagggcagcgtgcaatgattgttgcccagcctaaaacgggtaaaacg
atgttgcttaaagacattgcaaattccatttccgaaaaccacccagaagcttatatgatg
attttgctcatcgatgaaagaccggaagaggtgactgatatggaaagaagcgtaaatgca
gaagtaattgcctcaacttttgatgaacctgctgataaacacgtaaaagtcgccaatctt
gtactttcaaaagcacaaagaatggtagaatgcggtcatgatgtagtgattttactggat
tcaattacgcgtttggcaagagcttacaatacggtaactccagcttcaggaaaaattctt
tccggaggtgttgatgccaatgcacttcacaaaccgaaaagattcttcggtgcggcaaga
aatattgaaggcggcggttctttaaccatcattgcaacagcattaatcgatacaggttct
aaaatggatgaagttattttcgaagaattcaaaggaaccggaaatatggaacttcagctc
gacagaaaaattgccaacaaacgaatttatcctgcgattgatttggtatcatcaagtacg
agaagagatgatcttcttctagatgaaactacacagcagagaatgtggattttaagaaag
tatcttgcagacatgaatccagtagaagccatggaatttgtaaacaaaagcatcaaagga
actttaaacaacgaggagtttctgatgagtatgaacaggtaa
DBGET
integrated database retrieval system
