Kaistella faecalis: LL667_09790
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Entry
LL667_09790 CDS
T08247
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cfae
Kaistella faecalis
Pathway
cfae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LL667_09790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfae03019
]
LL667_09790
03016 Transfer RNA biogenesis [BR:
cfae03016
]
LL667_09790
Enzymes [BR:
cfae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LL667_09790
Messenger RNA biogenesis [BR:
cfae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LL667_09790
Transfer RNA biogenesis [BR:
cfae03016
]
Prokaryotic type
tRNA degradation factors
LL667_09790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_2
Motif
Other DBs
NCBI-ProteinID:
UFK97251
LinkDB
All DBs
Position
complement(2080465..2082819)
Genome browser
AA seq
784 aa
AA seq
DB search
MNAPQAIIEKIQLKDGREITIETGKLAKQANGSVVVRMGGTMLLATVVANKDASPGVDFL
PLTVDYREKFYSGGKIPGNFFRREARPSDEEILTMRLVDRVLRPLFPDDFHAEVQVMISL
ISYDKECMPEALAGLAASAAIAITDIPFNGPMSEVTVARIDGQLVVNPSRENLDKADLNI
LVGATKDSIVMVEGVMDEITEEEMIEAIKFAHEEIKVQVDAQVRLAERVGKSLPKREYSH
ENHDEEIREKVWKETFDKVYEVAKTPSAKEERGDNFKAVLEEFLAQYSEEELETVKPFAK
IYFHDVEKEAMRQMILNEKIRLDGRTPETIRPIWSEVDYLPGAHGSAVFTRGETQSLTAV
TLGSVKDANMVDSVAINYDEKFFLHYNFPPFSTGEARPLRGTSRREVGHGNLAQRALSRI
IPAENPYTIRIVSDILESNGSSSMATVCAGTLALMDAGVQITKPVSGIAMGLVTDPESGK
FTVLSDILGDEDHLGDMDFKVTGTADGITACQMDIKIQGLSMDIMETALKQARDGRLHIL
GEMLKTIDAPRVDVKPHAPKMEVLEIPKEFIGAVIGPGGKIIQQMQKDFDTVIAIEEIGE
IGRIEISGVSRENINATIAAINEITFVPTVGEVYNGKVVKVMDFGAFVAIAKGTEGLLHI
SEIEWARLDKVPYNEGDMVEVKFMGYDDRKKMKLSRKVLLERPPRTERKEGEGDNRENRD
NRGPRNDRRDDRRDGGDRRQGGNHRPGNDRPQHSGRTEERPAGEDTFKPLNESENTDDVK
PEGF
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgaatgctccacaagcaattattgaaaaaattcaattaaaggatggtagagagattacc
atcgagacagggaaactggcaaaacaggccaacggatctgtagtagtaagaatgggcgga
acgatgcttcttgccaccgttgtagccaacaaagacgcaagcccgggcgtggatttcctt
ccactgacggtagattacagagagaaattttattcaggcggaaagatcccaggaaacttc
tttagaagagaggcgagaccatctgacgaagaaatccttacaatgagacttgtagaccgc
gttttgcgtccgcttttcccggatgatttccatgctgaggttcaggtgatgatttccctg
atttcttatgataaagaatgtatgcctgaagcactggctggtttagccgcttctgcagct
atcgcgattaccgatatccctttcaacgggccaatgtctgaggttactgtagccagaatc
gacggacaacttgttgtaaacccaagcagagaaaatttagacaaagctgatcttaacatc
cttgttggtgctaccaaagactctatcgtaatggtagaaggggtgatggacgagattacc
gaagaggaaatgatcgaagccattaaattcgcgcacgaagaaattaaagttcaggttgat
gctcaggtaagacttgctgaaagagtaggcaaatctttaccaaaaagagaatacagccac
gaaaaccacgacgaagaaattcgtgagaaggtgtggaaagaaacttttgacaaagtatac
gaggtagccaaaactccttctgcaaaagaagaaagaggcgataacttcaaggctgttctg
gaagaattcctggcgcagtattctgaagaggaactggaaacagtgaagccattcgcaaaa
atctatttccacgatgtggagaaagaggcaatgcgtcaaatgatcctcaacgagaaaatc
cgtctggatggccgtacaccggaaaccatccgtccgatctggtcggaagtggattacctg
ccgggtgcacacggttctgcagtattcacaagaggtgaaacgcagtctttaacagcggta
accttaggttctgtaaaagatgccaacatggtagattcagttgcgattaattacgacgag
aaattcttccttcactataacttcccaccattctcaacgggtgaggcaagacctttaaga
ggaacatcaagaagagaagttgggcacggaaaccttgcacagcgcgcgctttcaagaatt
attccagccgaaaacccatatacgatccgtatcgtatccgatatccttgaatctaacggt
tcatcttcaatggcaacggtttgcgccggaacattggctctgatggacgccggtgtacag
attacaaaaccggtttcgggtatcgcaatgggattggtaactgatcctgaatcaggtaag
tttactgtactttctgatatcttaggagacgaagatcacttaggtgatatggactttaaa
gtaaccggaacggcagacggaatcacggcttgccagatggatatcaagatccagggactt
tctatggatatcatggaaactgcactgaaacaagcgagagacggccgtctacatatcctt
ggtgaaatgttgaaaaccatcgacgcacctagagttgacgttaaaccacacgctccgaaa
atggaagtactcgagattcctaaggaattcatcggtgcagttatcgggcctggcggaaaa
atcattcagcagatgcagaaagattttgatacggttatcgcgattgaagaaatcggtgag
atcggaagaattgaaatctccggcgtaagcagagagaatatcaacgcgaccattgctgcc
atcaacgaaattacatttgttccgactgtaggcgaagtttacaacggtaaggttgtgaaa
gtaatggatttcggtgcgtttgtagcaattgcgaagggtactgaaggtttgcttcacatc
tcagaaatcgagtgggcaagacttgacaaagttccttataacgaaggcgatatggtggaa
gtgaaattcatgggttatgatgaccgtaagaaaatgaaactttcaagaaaagtgcttttg
gaaagacctccgagaactgagcgtaaagaaggtgaaggtgacaaccgcgaaaaccgcgac
aaccgtggcccaagaaacgacaggagagatgaccgcagagacggtggcgacagaagacag
ggtggaaaccacagacctggaaacgacagaccacagcacagcggaagaactgaagaaaga
ccggctggcgaagataccttcaagccactgaacgaatcagaaaatactgacgatgtgaag
ccggaaggattctag
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