Kaistella faecalis: LL667_10695
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Entry
LL667_10695 CDS
T08247
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cfae
Kaistella faecalis
Pathway
cfae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LL667_10695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfae03019
]
LL667_10695
03009 Ribosome biogenesis [BR:
cfae03009
]
LL667_10695
Enzymes [BR:
cfae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LL667_10695
Messenger RNA biogenesis [BR:
cfae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LL667_10695
Ribosome biogenesis [BR:
cfae03009
]
Prokaryotic type
rRNA helicases
LL667_10695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
UFK97421
LinkDB
All DBs
Position
2279619..2281346
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AA seq
575 aa
AA seq
DB search
MNLFTETNLSPEILKAIGEMGFESPTEIQKQTIPFISTDIRDMIALAQTGTGKTAAFSLP
ILDMIDEGSRKIQFLVLCPTRELCLQITKDIKNYSKYMPSVKTTAVYGGSSIMDQIRSLR
EKPQIIVGTPGRVIDLINRKALDFSEIQWLVLDEADEMLSMGFKDDLETILRETPETKQT
YLFSATMNKEVERISKNYLTSPHRISVGSINEVKKNIKHEFYVVGYRHKKEALKRLIDAN
PNQYSILFCRTRMETQEVADFLMQNGYAADALHGDLSQAQRDTVMKKFRLKNIDILVATD
VAARGLDVNSLTHVIHYSLPDDPEVFVHRSGRTGRAGKDGISMSLIKPEESRKLKQIKSS
TKIDIVEKKIPTGEAIIKAQVGGVFEKLFTEHEEFFTFDDSLIPDLSEFSKEELVHKLLQ
LQLRDLAMFYKDKNDLADQKFNADDRGDSRRDRDRGRDRDRDRGRDRDRGDRRDSFRDGG
RDGGRDRDRKPRKNNGDMVRFFFNLGKKDQLKKMDMLEIINKSTAKSKKRPDIGEIEILE
KFSFFEVEKSFKDEVLKGLQTQKFKGKDMRAEVAN
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgaatttatttacggaaaccaatctaagtcctgaaattttgaaggcaattggcgaaatg
ggcttcgaaagccccacagaaatccaaaaacagaccattccttttatctctacagatata
cgcgacatgatcgcactagcgcagacggggacgggcaaaacagcagcattttcgcttccg
attttggatatgattgacgagggtagtcgcaaaatccaatttttggtgctttgtccgaca
agagaactgtgtcttcagattacgaaagacattaaaaattattcgaaatacatgccgagc
gttaaaaccaccgcggtttacggaggcagcagtattatggatcaaatccggtcactccgc
gaaaaaccacagattattgtgggtacgccaggtcgtgtgatcgatttaattaacagaaaa
gcattggatttttcagaaattcagtggttggttttagatgaagccgacgaaatgctttct
atgggtttcaaagatgatttggaaaccattttaagagaaactcccgagaccaaacaaact
tacctgttctcggcaacgatgaacaaagaggttgaaagaatttctaagaactacttaact
tcaccacaccgtatttcagtaggatcgattaatgaggtgaagaaaaacatcaagcacgaa
ttttatgtagtaggttaccgtcataaaaaagaagctttgaaaagacttatcgacgctaac
cctaatcaatactcgattcttttctgccgtacccgtatggaaacgcaggaagttgcagat
tttctgatgcagaacggttacgctgcagatgcgcttcatggtgatttgtcacaggctcag
cgtgatacggtaatgaaaaaattccgtctcaaaaatatcgatatcctggtagcgactgat
gttgcggcgagaggattggatgtaaattccttaactcacgtaattcattattcattgccg
gatgatcctgaagtttttgtacaccgaagcggtagaacaggaagagcaggaaaagacgga
atttctatgtctttaatcaagcctgaggaatccagaaaattaaagcagattaaatcttca
acaaaaattgatatcgttgaaaagaaaatcccaaccggagaagcgattatcaaagctcag
gtaggcggtgtcttcgagaaattatttaccgagcacgaagagtttttcactttcgatgat
tctttaattcctgatttgtcagaattctctaaggaagaactggttcacaaactccttcag
cttcagctgagagatttagccatgttctacaaagacaaaaatgatcttgctgaccagaaa
tttaatgctgatgacagaggcgacagccgtagagaccgcgatagaggcagagaccgggat
cgtgaccgcggaagagaccgtgaccgcggcgacagaagagacagcttccgagacggtgga
cgcgatggcggaagagaccgcgaccgtaaaccaagaaaaaacaatggtgatatggtgaga
tttttcttcaacttaggaaaaaaagaccagctgaagaaaatggatatgcttgaaatcatc
aacaaatctaccgcgaaatccaagaagagaccagatatcggagaaattgaaattttagag
aaattctcattcttcgaagtagagaagtctttcaaagacgaggttttgaaaggattacag
acccagaaatttaaaggtaaagatatgcgtgccgaagtggccaactaa
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