Kaistella faecalis: LL667_10730
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Entry
LL667_10730 CDS
T08247
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
cfae
Kaistella faecalis
Pathway
cfae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LL667_10730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfae03019
]
LL667_10730
Enzymes [BR:
cfae01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LL667_10730
Messenger RNA biogenesis [BR:
cfae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LL667_10730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
AAA_19
Cas3-like_C_2
HEM4
UvrD-helicase
Flavi_DEAD
P-loop_SecA
AAA_22
Phage_integrase
Motif
Other DBs
NCBI-ProteinID:
UFK97428
LinkDB
All DBs
Position
complement(2287310..2288563)
Genome browser
AA seq
417 aa
AA seq
DB search
MNFTDLNLIDPIAKALQEEGYTQPTPIQAKAIPSILQGRDLLGTAQTGTGKTAAFAIPIL
QNLTEKNIRNNQIKALILTPTRELAIQIEESFNAYGRHLKLRNLVVFGGVKQGAQENALR
RGVDILVATPGRLLDFISQGIISLKHLEIFVLDEADRMLDMGFVHDVKRITKLLPPKRQT
LFFSATFPDEISKLANSMLTNPVKVEVAPVSATADTIKQKVYFVDKENKLELLTHILQND
ISDSVLVFSRTKHGADKIARKLQSQKISAEAIHGNKSQNQRQNALNNFKSGKTRILVATD
IAARGIDIDELKYVVNFELSDVSETYVHRIGRTGRAGADGSSISFVDGLDLINLKSTEKL
IGKKIPVEKDHPFHTDNLVVEKRDSNNKSFTPRPKPQSKENIGYKKPKNKSNFSRSK
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
ttgaattttaccgacctaaatttaatcgatcctatcgctaaggcgctacaggaagagggt
tacacccaaccaacacctattcaggcaaaagcaatcccaagcattttacagggcagagac
cttctcggtactgcgcagacaggaacggggaaaactgcagcttttgccatcccgattctt
cagaatcttacagaaaaaaacattcgtaacaatcagatcaaagctttgattctaacgcct
accagagagttggcgattcagattgaagaaagcttcaatgcttacggaagacacttaaaa
cttagaaaccttgtggttttcggcggcgtaaaacaaggcgcacaggagaacgcactcaga
cgcggcgttgatatacttgtagcaacaccgggacgacttctggattttatttctcaggga
attatttcgctgaaacatctggaaatattcgtactagatgaagccgacagaatgctcgac
atggggtttgtacacgatgtgaaacgaattacaaaactgcttccaccgaaaagacagacg
cttttcttctcagcaacttttcctgacgaaatcagcaaactggcaaactcaatgcttacg
aatcccgtgaaagtagaggttgcaccggtttcggcaactgcagataccattaagcaaaaa
gtatattttgttgacaaggaaaataagcttgaacttttaacgcatattcttcagaatgat
atctcggattcggttttggtattttccagaacgaaacatggtgcagataaaatcgcaaga
aaactgcagtcgcagaaaatttcagctgaagcgattcacggaaataaatcgcagaatcag
agacagaatgcacttaataatttcaaatcagggaaaacaaggattcttgtcgctaccgat
atcgccgcacgtgggattgatattgacgaactgaaatatgtagtgaatttcgaactttcc
gatgtttccgaaacttatgttcaccgtatcggaagaaccggaagagcaggtgcagacgga
agttctatctcttttgttgacggtttggaccttattaatctgaaaagtacagaaaaactg
atcggcaagaaaattccggtagaaaaagatcatccttttcatactgataatctggtggtg
gaaaaaagagattctaacaacaaatcttttactccgcgcccgaagccacagtctaaggaa
aatatcggctacaaaaaaccgaaaaacaagagtaatttctccagaagcaaataa
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