Kaistella faecalis: LL667_11325
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Entry
LL667_11325 CDS
T08247
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
cfae
Kaistella faecalis
Pathway
cfae03030
DNA replication
cfae03430
Mismatch repair
cfae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cfae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LL667_11325 (holA)
03430 Mismatch repair
LL667_11325 (holA)
03440 Homologous recombination
LL667_11325 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cfae03032
]
LL667_11325 (holA)
03400 DNA repair and recombination proteins [BR:
cfae03400
]
LL667_11325 (holA)
Enzymes [BR:
cfae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LL667_11325 (holA)
DNA replication proteins [BR:
cfae03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LL667_11325 (holA)
DNA repair and recombination proteins [BR:
cfae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LL667_11325 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
UFK97542
LinkDB
All DBs
Position
2406819..2407856
Genome browser
AA seq
345 aa
AA seq
DB search
MKELDLVLKNIKNKEFLPIYFFHGEEPFFMDVAVKAFENDVLEEDEKAFNQTVVYGKDTT
FSEVLSLARQFPMMGEKQVIILKEAQEIRMIEKEAEALKFYAENPVESTLLIIAHKHKKV
DSRKSFAKILSKNKMLFESAKMRDYEVPKWIEQELRNAGLKAKPNIPALLSEYLGTDLSR
ISNELHKLKMILKNDEILDEKTIETHIGISKEFNVFELIKALGKKDESSALRIAHFIGKS
PKTNPLPMMMGNLYNFFSNLIIYHTSPGVQPNVLAGQMNVNPYFLKDFAEAARFYNLKHC
TRIISILREIDLKNKGLGAVNMEEGELLTEMVYKILHVDRLKVKV
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaattagatttagtcctcaaaaatattaaaaataaagagtttctgcccatttat
tttttccacggcgaagaacctttttttatggatgttgctgtgaaagctttcgaaaacgat
gtgttggaggaagatgagaaagcctttaaccaaaccgtagtttacggcaaagacaccact
ttttctgaggtactttctctcgcaagacaattcccgatgatgggcgaaaaacaggtcatt
attctgaaagaagctcaggaaatccggatgatcgaaaaagaagcagaagcgttgaaattt
tacgccgaaaatcctgtagaatccacacttttaatcattgcgcacaaacataaaaaagtc
gattcacgtaaaagttttgccaagattctttccaaaaacaaaatgcttttcgaaagcgct
aaaatgcgtgattacgaagttccgaaatggatcgagcaggaactacgcaacgctggtcta
aaagcaaaacctaatattccggctctactttcagaatatctcggcaccgatttatcacgg
atttcaaacgaactgcacaaactcaaaatgatcctcaaaaacgatgaaatcctggatgaa
aaaaccatcgaaacccacatcggaatcagcaaagaattcaatgtttttgaactcatcaag
gcattgggtaaaaaggatgaaagcagtgcactcagaattgctcatttcatagggaaatcg
ccgaagacgaatcccttgccaatgatgatgggcaacctttataattttttctcgaatctt
attatttatcatacatcgccaggcgttcagccgaatgttttagccgggcaaatgaatgtg
aatccgtattttttgaaagattttgccgaagcagcacggttttacaacctgaaacactgc
accagaatcatctcgatcctgcgtgaaatagatcttaaaaacaaaggcttgggcgctgta
aatatggaggaaggcgaactgctcaccgagatggtgtacaaaatccttcatgtcgaccgc
ttgaaagtgaaagtgtaa
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