Kaistella faecalis: LL667_11470
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Entry
LL667_11470 CDS
T08247
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cfae
Kaistella faecalis
Pathway
cfae03030
DNA replication
cfae03430
Mismatch repair
cfae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cfae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LL667_11470 (dnaE)
03430 Mismatch repair
LL667_11470 (dnaE)
03440 Homologous recombination
LL667_11470 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cfae03032
]
LL667_11470 (dnaE)
03400 DNA repair and recombination proteins [BR:
cfae03400
]
LL667_11470 (dnaE)
Enzymes [BR:
cfae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LL667_11470 (dnaE)
DNA replication proteins [BR:
cfae03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LL667_11470 (dnaE)
DNA repair and recombination proteins [BR:
cfae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LL667_11470 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
T2SSK
Motif
Other DBs
NCBI-ProteinID:
UFK97569
LinkDB
All DBs
Position
2441175..2445830
Genome browser
AA seq
1551 aa
AA seq
DB search
MYLIFDTETTGLPKNFNAPLTDSDNWPRMVQIAWQLHDRDGNLIENQDYIIKPEGYDIPF
NATRIHGISTKMAKEEGRDLADVLAEFNQVLQKAEVVAGHNIDFDYKIAGAEFHRKNTEN
ILQKIPSADTMELGTDFCKLGGGRNGRYKSPKLEELYEKLYGEKFDEAHNAAADVNATAQ
VFFEMMRIGIIPAENLKISEAQLQDFISTHPNPFPPFGIIIRRQVADSKNKKKIDFGDTD
EIEIGDYFNFHNHSIYSSLQASTHISDLVKKALANNFSAVGLVDLGNMMGAFKFVSEVEK
ANANIKKTYKEFEEKKVKAEEEGQQFSDPEPRKEPLIPVIGCEFYISDRPEQKQFTKDDP
DRRTNVVLLAKNFNGYKNLAKLSSLGYVNGFYFGVPRISRKMIAEFKDDLIALTAGTLGD
IPNTVLEFGEQKGEELFKWWKDTFAEDFYVQIQNHQVEEEEHLNEVLLEFAEKYDVKILA
QNETFYTEKADANIQDILYCIKDGEKLSSPVGKGFGKRRGLPSTEFYIKNADELKQTFIQ
FPDAFEAYTEFLAKFEPYTLKRDVLLPEFDIPEEFLSDEDKIDGGKRGENAYLRHLTYEG
AAKRYGEVTEEIIERLDFELEVIANTGYPGYFLIVQDFCNEARKMGVWVGPGRGSAAGSA
VAYCTGITNVDPIKYDLLFERFLNPERISMPDIDIDFDDEGRDKIIKWVVEKYGKTNVAQ
IITYSVLGGKSAIKDAGRVLDLSIPETNNIAKLIPPSPGMNIAKAFSKFDKLSPEDKVLA
QEMKDILENKQDSRFGVLSAAQRMEGCIRNTGIHACGVIITPEDISNLVPITIAAKDPDI
LVSQFDNSVAESAGLLKMDFLGLRTLTIIKHAIKLIKERHQVDINPDEIPLDDLKTYQLF
QEGRTIGIFQYESPGMQKYMRELKPTQFADLIAMNALYRPGPIKYIPNFINRKNKLEETV
YDLKETEEFLAETYGITVYQEQVMLLSQKLANFTKGEADTLRKAMGKKDRATLDKMYPKF
IEEGEKNNLAIDKLNKIWKDWEAFAEYAFNKSHSTCYALIAYQTAYLKANYPAEYMASVM
TNNLNNTKQITMFMEDCKSIGVDVLGPSVNESQYEFSVNEKGQIRFGLGAIKGIGEGPSE
AIVNTRKAGRFKNIYDFFEKIPSSQMNKRVAESLVVAGAFDEVDRYHRAQYFDIDISGKT
NIERLLRYGQSFQDNINEIENSLFADFADEVKIEQPKINPAPEWQSMHKLNKEKEIIGFY
LSAHPLDEYKFQYQFIQGALGKKEILEGKKDDVAELEKIILPVELADVADVDDELIDIPA
DILSGEEETLIEEPSKKAEPKGSFNFLNLDEVEAFKDSVFANQQPDLFSDEKLSWKEKQA
QKNNSPEYMVAGLVTEYSVRDGKNSGEKIAFITLEDYSGSYGFRLGDRDYMRLRDKIDVQ
RFVIFKIKFSQGKDGRVFVNVAEVIDLKDAFEKFAKKMTVVVNLQDLRREDIDFFKANFI
ENQGEQKLNFFVKNPEDQSTIELMSMKAHVEINGDLLEIIHDMQKYEVFLN
NT seq
4656 nt
NT seq
+upstream
nt +downstream
nt
atgtatttgattttcgataccgagactacgggtttacctaaaaatttcaacgcaccgctt
accgattccgacaattggcccaggatggttcagattgcctggcaactgcatgaccgtgat
ggtaatttgattgaaaatcaggattacattattaaacccgaaggttacgatatccctttt
aacgcgacaagaattcacgggatttccaccaaaatggcaaaggaagaaggccgggatttg
gcggatgtgctggccgaatttaatcaggtgttgcagaaagctgaagtcgttgccgggcat
aatatcgatttcgattacaaaattgctggtgcagaatttcacaggaagaatactgaaaat
atattgcagaaaatcccctccgcggatactatggaactgggaacagatttctgtaaattg
ggtggcggaagaaacggcagatacaagtctcccaaactcgaggaactttacgaaaaactt
tacggtgaaaaatttgatgaagctcataatgccgctgccgacgtaaatgcgactgctcaa
gtattttttgaaatgatgcgtatcggtattattcctgccgaaaatctcaaaatatcagag
gcgcaacttcaggattttatctcaactcatccaaatccgtttccgccatttggaatcatc
atccgcaggcaggttgccgactcgaaaaataagaaaaaaattgattttggggatactgat
gaaatcgaaattggtgattattttaattttcataatcacagcatttactcctcactgcag
gcgtcaacacatatttcagaccttgtcaaaaaagcgttggccaataatttttctgctgta
ggactggtagatttggggaatatgatgggcgctttcaagtttgtttccgaagtggaaaaa
gccaatgcaaacatcaaaaaaacatacaaagaattcgaagagaaaaaagtaaaagcagag
gaagaaggacagcagtttagtgaccctgagccaagaaaggaaccgctcataccggtaatc
ggatgcgaattttatatttccgacaggcccgagcagaagcagtttaccaaagatgatccc
gaccgcaggaccaatgtggttttacttgcgaaaaattttaacggatataaaaatctggca
aaactttcgagtttgggttatgtaaatgggttttattttggtgtcccgcggatctcacga
aagatgattgctgagtttaaagatgatctgattgcgcttactgccggaactttgggcgat
attcccaatactgttctggaatttggtgagcagaagggagaggaacttttcaaatggtgg
aaagatacttttgcagaagatttctatgtgcagatccagaaccatcaggtggaagaggaa
gaacatttaaatgaagtactgcttgaatttgcagaaaaatacgatgtgaaaattctggct
cagaatgaaaccttctacaccgaaaaagccgatgccaatattcaggatattttatactgt
atcaaagatggtgaaaaactgtcttcacctgtggggaaaggttttggtaaaagaagaggt
ttgccgtccacagaattttatatcaaaaatgctgatgaactgaaacagacttttatccag
tttcctgatgcgtttgaggcttacactgaatttttggccaagttcgaaccttatacctta
aaacgtgatgtactgcttccagagtttgatattcccgaagaattcttaagcgacgaagat
aagatagatggcggaaaacgtggtgaaaacgcttatcttagacatttaacctacgaaggt
gctgcaaaaagatatggtgaagtaactgaggagatcatagaaaggctggattttgaactt
gaagttattgccaatacggggtatccggggtactttcttattgtacaggatttctgcaac
gaagcccgtaaaatgggcgtatgggttggtcccggccggggttctgcagccggttctgcg
gtagcgtattgtacaggaatcaccaatgtagatcctattaaatatgatttgctatttgag
cgttttcttaatcctgaaagaatttcaatgccggatatcgatatcgatttcgatgacgaa
ggacgcgataaaatcatcaaatgggtggttgaaaaatacggcaagacgaatgttgcgcag
attatcacctactcggttctgggcgggaaatcagccattaaagatgcaggaagggttctg
gatctttcaattccggaaaccaacaacatcgccaaactgatccctccaagtccagggatg
aatatcgcgaaagctttttctaaatttgataaattaagtcctgaagacaaagtacttgca
caggaaatgaaagatatcctggagaataagcaggattcaagatttggagtgctttccgct
gcacagcgaatggaaggttgtatcagaaatacaggaattcatgcctgtggggtaattatt
actccggaagatatttcgaaccttgtccccattaccattgcggcaaaagatcccgatatt
ctggtttcgcagttcgataactctgtagccgaaagtgccggtttgcttaaaatggatttc
cttggtttgcggactttaaccatcattaagcacgctatcaaacttatcaaagaaagacac
caggttgatattaatcctgatgaaattccgcttgatgaccttaagacttatcagctgttt
caggaaggaagaacgattggaattttccagtatgaaagtcccgggatgcagaaatacatg
cgcgaacttaaaccgacacagtttgcagatttaatcgccatgaacgcgctgtacagaccg
ggtccaataaaatacatcccgaatttcatcaacaggaagaataaactcgaagaaacagtt
tacgatctgaaggaaaccgaagaattcctcgcagaaacgtatggaattacggtatatcag
gagcaggtaatgcttctttcccaaaaactggccaactttaccaaaggagaagccgatacg
ctgagaaaagcgatgggtaaaaaggaccgcgccacgctcgataaaatgtatccgaaattt
atcgaagaaggggagaaaaacaatctcgcgatcgataaactcaataaaatctggaaagac
tgggaagcttttgccgaatatgccttcaacaaatcccactccacctgttatgcgctgatt
gcttatcaaaccgcttatctgaaagccaattacccggcagaatatatggcgagtgtaatg
accaataacctgaacaatacaaagcagataaccatgtttatggaggactgcaaaagtatt
ggggtagatgttttgggaccttctgtaaacgaatcacagtacgaattttcggtgaacgaa
aaaggacagatccgttttggccttggcgcgattaaaggaattggggaaggaccgagtgaa
gccatcgtgaacacaagaaaggccggaagattcaaaaatatttatgatttcttcgaaaag
attccgtcgtcacagatgaacaaaagagtagcggaaagtttagtggtggcaggagctttc
gatgaggtcgaccgttatcaccgtgctcaatatttcgatattgatatctccggaaaaaca
aatattgaaagacttctgcgttacgggcagagttttcaggacaatatcaacgagatcgaa
aattcactttttgccgattttgctgatgaagtaaaaatagaacagccaaaaataaatccg
gctccggagtggcaaagcatgcataaactcaacaaggaaaaggaaattatcggattttat
ctctctgcgcatccgctggacgagtacaaatttcagtatcagttcattcagggtgcttta
ggaaaaaaagaaattctggaaggtaaaaaagacgatgttgctgaacttgaaaaaataatt
ctaccggttgaacttgcagatgtagctgacgttgatgatgagttaatcgatattcccgcc
gatattttaagcggcgaagaagaaactttgattgaagagccttcgaaaaaagcagaacct
aagggaagttttaatttcctgaatcttgatgaggttgaagcctttaaagattctgttttt
gccaatcagcagccagatctgttcagtgatgaaaaattgagctggaaggaaaaacaggcg
cagaaaaataattctcctgaatatatggtcgcagggttggtgaccgaatacagcgtgcgc
gatggtaaaaacagcggcgagaaaatagcattcattactctggaagattacagcgggagt
tacggtttccgccttggtgaccgcgattatatgagattgagagataaaattgatgtgcag
cgttttgtgatctttaaaattaaattttctcagggtaaagacggaagagtcttcgtaaat
gtcgctgaggtcatcgatctgaaagatgcttttgagaaatttgcaaagaaaatgaccgtc
gttgttaatctgcaggatttgcgaagggaagatattgacttcttcaaagcgaattttatc
gaaaatcagggcgagcaaaaactgaacttttttgtaaagaaccccgaagatcagtcgaca
attgaattgatgtcgatgaaggcacatgtggaaataaacggtgacctgctcgagattatt
cacgatatgcagaaatatgaggttttcctgaactaa
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