Chamaea fasciata (wrentit): 136285184
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Entry
136285184 CDS
T11360
Symbol
EXOSC8
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
cfai Chamaea fasciata (wrentit)
Pathway
cfai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
136285184 (EXOSC8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfai03019
]
136285184 (EXOSC8)
Messenger RNA biogenesis [BR:
cfai03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
136285184 (EXOSC8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Modigliani
Motif
Other DBs
NCBI-GeneID:
136285184
NCBI-ProteinID:
XP_066032135
LinkDB
All DBs
Position
Unknown
AA seq
276 aa
AA seq
DB search
MAAAFKTVEPLEYYRRFLKENCRPDGRELGEFRTTTVNIGSITTADGSALVKLGNTTVIC
GVKAELAAPAVDSANKGYIVPNVELPSLCAERFRSGPPGEEAQAASQFIADVIENSQMIV
KEDLCIANGKLAWVLYCDIICLDYDGNLLDASVFALLAALKNVQLPLVTINEETGLSEVN
LKQKNPLIIRKHPVATSFAIFDDTLLIVDPTAEEEDLATGTVTIVTDEEGRLCSVHKPGG
SPLTGAKLQDCITRAITRHKEVKKLIDKVIKSLTPK
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgttcaaaactgtggaaccattggaatattacaggaggtttttgaaagag
aactgtcggcctgatggaagagagttaggtgaatttcggacaaccactgtcaacataggt
tcaattacaactgcagatggttctgccctggtgaagttaggaaataccacagtgatttgt
ggagtaaaagcggaacttgctgcacctgcagtggattctgctaataagggatatattgtt
ccaaatgtagagctgccatccctctgtgcagagaggtttcgctctggaccacctggggaa
gaggctcaagcagcaagccagtttatcgcagatgtgattgaaaattcacagatgatagtg
aaagaagatctgtgtattgccaatggcaagcttgcttgggtgttatactgtgatatcata
tgtctggactatgatggaaaccttctggatgccagtgtctttgctttgttggcagcatta
aaaaacgtgcaattgccgttggttacgataaatgaagaaactggtttatcagaagttaat
ttaaaacagaagaatcctttgattatcagaaagcatccagttgccacatcatttgctata
ttcgatgacacgttactcattgttgatccaactgctgaagaagaagatttagcaactgga
acagtaaccattgtaactgatgaagaaggcagactctgttctgtccataaaccaggtgga
agtcctcttacaggagccaagcttcaagactgtatcaccagagcaattacaagacacaaa
gaagtaaagaagctgatagacaaagtaataaaaagtttaacacccaagtga
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