Chamaea fasciata (wrentit): 136285458
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Entry
136285458 CDS
T11360
Symbol
TGFBRAP1
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1 isoform X1
KO
K20177
vacuolar protein sorting-associated protein 3
Organism
cfai Chamaea fasciata (wrentit)
Pathway
cfai04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cfai00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
136285458 (TGFBRAP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cfai04131
]
136285458 (TGFBRAP1)
Membrane trafficking [BR:
cfai04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
136285458 (TGFBRAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
zf-Vps39_C
CNH
Clathrin
VPS3_N
Motif
Other DBs
NCBI-GeneID:
136285458
NCBI-ProteinID:
XP_066032752
LinkDB
All DBs
Position
Unknown
AA seq
870 aa
AA seq
DB search
MNHPEDTMSVKAFKLVSAVEREMLMGDKNYINIECIECCGKNLYIGTNDCFIYHFLLDEK
VSTAGKISFAATKQLHKYLGLKKPVSELKAASALTRLLVLCDNTITLVNMINLEPVPTGA
RIKGAVTFTLNENPVSGDPFCVEVCIISVKRRTIQMFMVFEDRVQIVKEVFTPEQPCAVA
VDGYYLCLALTTQYIILNYNTGVSQDLFPYCSDEKRPIVKRIGRQEFLLAGPGGLGMFAT
VDGISQRAPVHWSENVIGAALCFPYVVALDDEFITVHSMLDQQQKQTLPFKEGHILQDFE
GKVIVATNKGVYILVPLPLERQIQDLLASHRVEEALVLAKGARRNIPKEKFQVMYKRILQ
QAGFIQFAQLQFLEAKELFRSGQLDVRELISLYPFLLPTSSSFIRSHPPLHEYADLNQLT
QGDQEKMTKCKRFLMSYLNEVRSTEVANGYKEDIDTALLKLYAEANHESLLDLLVSENFC
LLTDSAAWLEKHKKYFALGLLYHYNGQDAAALQLWVKIVDGDIQDSTRSDLYEYIVDFLT
FCSDQDLVWKYSEWILEKNEEIGVQIFTKRPLEEQEKNNFNPDDIISCLNKYPKARVKYL
EHLVLERKIQKEKYHTHLAVLYLEAILQLKSVTTDNCTETTELLLKLRSLLQKSDLYRIR
FILDKIQGTDLHMESAILYGKLEEHEKALHILVHELKDFHAAEEYCMWNSENRDVQYRRR
LFHMLLSVYLTPDASDCALVVAAVDLLNNHAAEFDAGLVLQVVPDSWSVQLLSPFLAGAV
RQSIHTKRMTQVALGLAQAENLIYKHEKVKQKGAPILLSDKKVCQVCQNPFCEPVFVRYP
NGSMAHTHCAANRHLHSNVTHHSPSASNQT
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgaatcacccagaagacacaatgagcgttaaagccttcaagctcgtttctgctgttgag
cgggagatgttaatgggagacaaaaattacatcaacatcgagtgcattgagtgttgtggg
aagaacctctatattggaaccaatgactgctttatctatcactttctgttggatgaaaag
gtatcaacagctggaaaaataagttttgctgccaccaagcaactacacaaatacctgggt
ttgaagaagcctgtgagtgagttgaaagcagcttctgccctcactagactgcttgtgctt
tgtgacaacacgataacactagtgaacatgatcaacttggaacctgtccccactggtgct
aggatcaaaggagctgtgacattcacactgaatgaaaaccctgtgagtggggatcctttc
tgcgttgaagtttgcattatctcggtcaaacgtcggaccattcaaatgttcatggtgttt
gaagacagagtccagatagtgaaggaagtgtttactccagaacaaccctgtgctgtggct
gtagatggttactacttatgccttgcccttactacacagtatataattttgaattataat
actggtgtctcccaggacctatttccttattgcagtgatgagaaacggccaattgtgaaa
agaataggcagacaagagtttctgttggctggccctggaggcctaggcatgtttgctact
gtagatgggatttcacagcgtgccccggtgcactggtcagagaatgtgatcggggcagct
ttgtgctttccttacgtggtggctctcgatgatgagttcattacggtgcacagcatgctg
gaccagcagcaaaagcaaaccctgccttttaaagaaggtcacattctacaggacttcgaa
ggaaaggtgattgttgctactaacaagggtgtatatattttggtgccactacctttggaa
agacagattcaggatcttctagctagccacagagtggaagaagcccttgttctagcaaaa
ggagctcgaaggaatattccaaaagagaaatttcaggtaatgtacaaacgaatcctgcag
caagcaggttttatacagtttgcacagcttcagttccttgaagcaaaagaactcttcaga
agcggccagcttgatgtccgggagctgatctctctgtaccccttcctgttgcctacttcc
tcttcatttatccggtctcatccccctctgcacgagtacgcggacctgaaccagctgacc
caaggggaccaggagaagatgacaaaatgcaaacgattcctcatgagttacttgaatgaa
gtccgcagcactgaggttgcaaatggctacaaggaggatatcgacacggctttgctcaaa
ctgtatgcagaggcaaatcatgaaagcctgctggatctcctagtttcagagaacttctgt
cttttaacagatagtgctgcctggctggaaaaacacaaaaagtattttgcgctaggtctc
ctgtatcactacaatggtcaagatgctgcagcacttcagttatgggtgaaaatagttgat
ggagacattcaagattctacacgttcagatctctatgagtacatagtcgacttccttacg
ttctgctcagaccaagacctagtgtggaagtactctgaatggattttagaaaaaaatgaa
gagattggtgtacagattttcactaaaagacctttggaagagcaggagaaaaacaacttt
aatccagatgatatcatcagttgccttaacaaatatcctaaagcacgtgtcaaatatcta
gaacatctagtactggaaagaaaaatacagaaagaaaagtaccatactcatctagctgtc
ttgtacttggaggcaatacttcagctaaaatccgtgaccacagataattgtacggaaaca
actgaactgctgttgaaactgcgcagtctgcttcagaaatctgatctttatagaattcgc
tttattttagacaaaatccagggcacagaccttcacatggaaagtgcaattttatatggg
aaactagaagaacatgagaaggctttgcatatcctggtccacgagttgaaggacttccat
gctgctgaagaatactgtatgtggaactctgagaacagagacgtgcagtacaggcggagg
cttttccacatgctgttgtcagtgtatttaactccagacgcttcggattgcgcgctcgtc
gtggctgctgtggatctcctgaacaaccacgctgcggaatttgatgcaggtctagttttg
caggtggtgcctgacagctggtcagtgcagctcctctccccgttcctggctggagcagtg
agacaaagcattcacacaaaaagaatgactcaggtggcacttgggttagcccaagctgaa
aacctaatctacaagcacgagaaggttaaacaaaaaggagccccgattcttctttcagac
aaaaaggtgtgtcaggtgtgccaaaatcctttctgcgagcctgtgtttgtaagatacccg
aatgggagtatggcccacacgcactgtgctgcaaacagacatctccattccaatgtgact
catcactctcccagcgccagcaatcagacttga
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