Chamaea fasciata (wrentit): 136286436
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Entry
136286436 CDS
T11360
Symbol
XRN2
Name
(RefSeq) 5'-3' exoribonuclease 2
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
cfai Chamaea fasciata (wrentit)
Pathway
cfai03008
Ribosome biogenesis in eukaryotes
cfai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfai00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
136286436 (XRN2)
09123 Folding, sorting and degradation
03018 RNA degradation
136286436 (XRN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfai03021
]
136286436 (XRN2)
03019 Messenger RNA biogenesis [BR:
cfai03019
]
136286436 (XRN2)
03009 Ribosome biogenesis [BR:
cfai03009
]
136286436 (XRN2)
03016 Transfer RNA biogenesis [BR:
cfai03016
]
136286436 (XRN2)
Transcription machinery [BR:
cfai03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
136286436 (XRN2)
Messenger RNA biogenesis [BR:
cfai03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
136286436 (XRN2)
Ribosome biogenesis [BR:
cfai03009
]
Eukaryotic type
Pre-60S particles
RNases
136286436 (XRN2)
Transfer RNA biogenesis [BR:
cfai03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
136286436 (XRN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRN_M
XRN_N
Motif
Other DBs
NCBI-GeneID:
136286436
NCBI-ProteinID:
XP_066034096
LinkDB
All DBs
Position
Unknown
AA seq
949 aa
AA seq
DB search
MGVPAFFRWLSRKYPSIIVSCVEEKAKDCNGVKVPIDTSKPNPNEVEFHNLYLDMNGIIH
PCTHPEDKPAPKNEDEMMVAIFEYIDRIFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR
ASKEGMEAAEEKQKIRQEILAKGGFLPPEELKERFDSNCITPGTEFMDNLAKCLRYYVAD
RLNSDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG
LATHEPNFTIIREEFKPNKPKPCALCNQMGHEVKDCQGLPREKQGKHDQFADTLPISEQE
FIFIRLCVLREYLERELTMASLPFSFDFERSVDDWVFMCFFVGNDFLPHLPSLEIREGAI
DRLVNIYKNVVHKTGGYLTESGFVNLQRVQMIMLAVGEVEDSIFKKRKDDDDNFKRRQKE
KRKRLKRDQPSFIPGGQFSPQALGNRSSPQAICNPRQAAFEMRMHDRQNSTTSASPNTSL
TPDGSPSLGGGIKRKSEDSDSEPEPEDNIRLWEAGWKQRYYKNKFDVDASDEKFRRKVVQ
SYVEGLCWVLRYYYQGCASWNWYYPFHYAPFASDFEGIADMPSDFERGSKPFKPLEQLMG
VFPAASGNFLPPTWRKLMTDPESSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRA
ALEEVYPDLTPEESRRNSLGGDVLFVGKHHPLCDFIVEQYKTKNTEAVDIPPELCHGIQG
KLTLNDSAVLPDQVVQSPVPMLRDLTQNSAVSISFKDPQFAEDFVFKATVLPGAKKPAPV
LKPGDWEKTHSDGRPWRPQLGFNRDRKPVHLDQSAFRTLGHTMPRDRGMPGMYPNAVPLG
AYGSPYARPLMGGQQQIPKLLSNLRPQESWRGPTPLFQQTPQRTTGAAPLLAWNRMLQSP
NQFQPAQYQGLGPMGYPQRPEDRMDRGRQAYGPGRPYPLPPPAGRYSWN
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgggggtcccggcgttcttccgctggctcagccgcaagtatccctccatcatcgtcagc
tgcgtcgaggagaaggccaaagattgcaatggtgtcaaggtccccattgacacgagcaaa
cccaaccccaacgaagtggagttccacaacctctacttggacatgaatggcatcattcac
ccctgcacacacccagaggacaagccagcgcccaaaaatgaagatgagatgatggtggcg
atttttgagtatatcgacaggatctttaacattgtgagaccaaggagactcctttacatg
gccattgatggagtggctccacgtgccaaaatgaatcaacagcggtccaggagattcaga
gcctcaaaggagggcatggaagctgctgaggagaagcaaaaaatccgacaagaaattctg
gccaaaggtggctttctgcctccagaggagctgaaggagaggtttgacagcaactgtatc
accccgggaactgagtttatggacaatcttgctaaatgccttcgctattacgttgctgac
cgcttgaacagtgacccaggctggaagaacctgacagttattttgtcagatgccagtgct
cctggtgaaggggagcataaaatcatggattacatcaggagacaaagggctcaaccaaac
catgacccaaacactcaccactgtctgtgtggggctgatgctgatctgatcatgcttggc
ttagctacacatgaaccaaacttcaccatcattagggaagagttcaaaccaaacaaaccc
aagccatgtgctctctgtaaccagatggggcatgaggttaaggattgccaaggtctgccc
agagagaaacaaggaaagcatgatcagtttgccgacacgttgccaatctcggagcaagaa
ttcatcttcatccgcctctgtgtccttcgagagtacttggagagagaactcaccatggcc
agcttgcctttcagttttgattttgaaaggagtgttgatgactgggtcttcatgtgcttc
tttgtggggaatgacttcctacctcatctgccatctctggagatcagggagggagcgatc
gatcgcttggttaacatctataaaaacgtggtgcacaaaactgggggctacctgactgaa
agtgggtttgtgaacctgcagcgggtccagatgatcatgctggctgttggggaagttgaa
gacagtattttcaaaaagaggaaagatgacgatgataactttaaaagacggcaaaaagaa
aaaaggaagagattgaaaagggatcagccttcctttattcctggtggccagttttcccct
caagccctgggaaatcgatccagccctcaggcaatctgtaaccctcggcaagctgccttt
gagatgaggatgcatgacaggcagaactctacaacttcagcatctccaaacaccagcctg
actcctgatggcagcccatccctgggaggaggaattaagcggaaatctgaggacagtgac
agtgaacctgagccagaggataatatcaggttgtgggaagctggttggaagcagcgctac
tataaaaacaaatttgatgtggatgcctcggatgagaaattccgtcgcaaggttgtgcag
tcctatgtggaagggctttgctgggttctcagatattattatcagggctgtgcatcctgg
aattggtattaccctttccactacgcaccctttgcctcggacttcgagggcattgcagac
atgccttcagactttgagaggggctccaaaccgttcaagcctcttgaacagctgatgggg
gtgttcccggctgccagtggaaacttcctgccgccaacatggaggaaactcatgacagac
ccggaatcaagcatcattgacttctaccccgaagattttgctattgatttgaatgggaag
aagtatgcttggcaaggtgtggcattgttgccctttgtggatgagcgacgcctcagagct
gccctggaggaagtgtaccctgacctcactccggaagagagcaggaggaacagccttggt
ggtgatgttctctttgtgggaaagcaccatccactctgtgacttcattgtggagcagtac
aagaccaagaacacagaggcagtggacatcccgccagagctgtgccatggcatccaggga
aagctcaccctgaacgacagtgctgtcctcccagatcaggtggtgcagtctcctgttccc
atgcttcgggatctgacacagaactctgcagtcagcatctcattcaaagatccacagttt
gctgaagactttgttttcaaggctacagtcttacctggggcaaagaaacctgctccagtt
ctgaagccaggggactgggaaaaaacccacagtgatggcaggccttggagaccacagctt
ggctttaacagggacaggaaaccagtgcatttggatcagtcagcattcagaaccttgggg
cacacgatgccaagggacaggggcatgccagggatgtaccccaacgctgtgccgcttgga
gcctacggcagcccctacgccaggcctctcatgggtggccagcagcaaatccccaaactg
ctgtcaaatcttcggccccaggagtcctggcgaggtcccacacccttgttccagcagaca
ccacaaagaaccaccggagctgctcctctcctcgcctggaaccgcatgctgcaatcccca
aaccagttccagccagctcagtaccaggggctggggccaatgggatacccacagagacct
gaggaccgaatggacaggggcagacaggcatacggccccgggaggccctaccctctccca
cctcctgcaggaaggtacagctggaattag
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integrated database retrieval system
