Chamaea fasciata (wrentit): 136287457
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Entry
136287457 CDS
T11360
Symbol
TRIM54
Name
(RefSeq) tripartite motif-containing protein 54 isoform X1
KO
K10653
tripartite motif-containing protein 54
Organism
cfai Chamaea fasciata (wrentit)
Pathway
cfai04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cfai00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
136287457 (TRIM54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cfai04121
]
136287457 (TRIM54)
Ubiquitin system [BR:
cfai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
136287457 (TRIM54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
RING_XB3-XBAT31
zf-C3HC4
zf-RING_5
zf-B_box
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
TRIM_CC
Sina_RING
RHH_9
CYP38_PsbQ-like
Prok-RING_4
Zn_ribbon_FGT1_2
DUF5799
CoiA_N
Motif
Other DBs
NCBI-GeneID:
136287457
NCBI-ProteinID:
XP_066036329
LinkDB
All DBs
Position
Unknown
AA seq
418 aa
AA seq
DB search
MNFAVGLKPLLAEARSMESLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDVFQASNP
LWQSRGSSAVPSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESARPLHAKA
EQHLMCEEHEDERINIYCLRCEAPTCSLCKVFGAHKDCEVAPLPAVYQRQKVGGPWGLGG
PLGFGGAPGVWGGPGYPHSHPHPPALYPQSELSDGIAMLVAGNDRIQAIITQMEEICHTI
EENGRRQKQHLGLRFDALYGILEERKKELLQSIAAEQEAKLQRVRGLIRQYGDHLEASSK
LVESAIQAMEEPQMALYLQHSKELLKKITDMSKASMSSRPEPGYENMDHFSINVDYVAEM
LRTIEFQTEPLGEDEGEGPGDGSEAAADEDRLDSLEVPEAAEDVGPRQKPASSPHGQH
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcgcggtggggctgaagccccttctggcggaggcgcgaagcatggagagcctg
gagaagcagctcatctgccccatctgcctggagatgttcaccaagcccgtggtcatcctg
ccctgccagcacaacctctgccgcaagtgcgccaacgacgttttccaggcctccaacccg
ctgtggcagtcgcggggctccagcgccgtgccgtcgggcgggcggttccggtgcccgtcg
tgccggcacgaggtggtgctggaccggcacggggtgtacggactgcagcggaacctgctc
gtggagaacatcatcgacatctacaagcaggagtcggcccgaccccttcatgccaaggcc
gagcagcacctcatgtgtgaggagcacgaggacgagcggatcaacatctactgcctgcgc
tgcgaggcgcccacctgctccctctgcaaggtcttcggggcgcacaaggactgcgaggtg
gccccgctgccggccgtctaccagcgccagaaggtggggggcccctggggtctggggggg
cccctggggtttgggggggcccctggggtctggggggggccggggtacccacacagccac
cctcacccccctgccctctacccccagagcgagctcagcgacggcattgccatgctggtg
gcggggaacgatcgcatccaggccatcatcacgcagatggaggagatctgccacaccatc
gaggagaacggccggcggcagaagcagcacctggggctgcggttcgacgccctctacggg
atcctggaggagcgcaagaaggagctgctgcagagcatcgcggccgagcaggaggccaag
ctgcagcgcgtccgggggctcatccgccagtacggagaccacctggaggcctcctccaaa
ctggtggagtcagccatccaggccatggaggagccccagatggccctgtacctgcagcac
tccaaggaactgctgaaaaagatcacagacatgtccaaggcatccatgagcagccgcccc
gagcccggctatgagaacatggaccacttctccatcaatgtggactacgtggctgagatg
ctgaggaccatcgagttccagacagagcccctgggtgaggatgagggtgaaggacctggg
gacggcagtgaggctgcagcggatgaggatcggctggacagcctggaggtgcccgaagct
gctgaagatgtggggccgaggcagaagccagcgagttctccccatggccagcactga
DBGET
integrated database retrieval system
