KEGG   Chamaea fasciata (wrentit): 136287814
Entry
136287814         CDS       T11360                                 
Symbol
COL9A1
Name
(RefSeq) collagen alpha-1(IX) chain isoform X1
  KO
K08131  collagen type IX alpha
Organism
cfai  Chamaea fasciata (wrentit)
Pathway
cfai04510  Focal adhesion
cfai04512  ECM-receptor interaction
cfai04518  Integrin signaling
cfai04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cfai00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    136287814 (COL9A1)
   04518 Integrin signaling
    136287814 (COL9A1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    136287814 (COL9A1)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    136287814 (COL9A1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:cfai00535]
    136287814 (COL9A1)
Proteoglycans [BR:cfai00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   136287814 (COL9A1)
SSDB
Motif
Pfam: Collagen Laminin_G_2 Laminin_G_3
Other DBs
NCBI-GeneID: 136287814
NCBI-ProteinID: XP_066036638
LinkDB
Position
Unknown
AA seq 928 aa
MKSYWKITAFFYLCSFLWSFISATIQHQSRLPVILGASHRIDICPTIRIGQDDLPGFDLI
SQFQIEKAASQGIIERVVGSTSLQVAYKLGPNVDFRIPTSAIYSNGLPDEYSFLTTFRMT
GATLQKYWTIWQIQDSSGKEQVGVNLNGQMKSVEFSYKGADGKHQTASFLHLPFLFDSQW
HKLMIIVESNSVTLFIDCIKIESLNIKPKGKINTDGFAVLGKLKNNPQISVPFEIQWMVI
HCDPLRPQREGCGELPARVRDLSCPVLSTSAVHERGPPGPPGPPGPPGPPGVPGIDGIDG
ERGPKGPPGPPGPDGDAGKPGSPGLPGEPGADGFTGPDGSRGAPGPKGQKGEPGLPGVRG
LPGKGLLGPPGPAGAAGLPGEVGRAGPPGDPGKRGPPGLPGPPGPPGTIGLQDGDVLCPS
ACPPGRPGHAGLMGMKGQKGSKGESGEPGKQGYKGEEGDQGPSGEVGAQGPPGILGIRGI
TGIMGPKGTKGARGLDGDPGPQGLPGAPGDQGQRGPLGEAGPKGERGPQGTRGINGLPGP
KGEPGLPGVDGREGIPGMPGAKGEPGKPGAPGDTGLQGLPGFPGSPGMKGIPGPKGNKGP
PGVPGLMGNPGKQGQQGPEGEAGPTGPRGPPGSRGETGPAGPPGLPGKLGPQGNIGLPGL
PGPPGLPGGKGDRGSVGEPGPKGEQGAPGAEGDGGEKGDLGDMGLPGAKGAVGNPGDPGS
RGPEGSRGLPGMEGPRGSPGPRGLPGEQGAPGLPGSEGPAGKEPSDQHIKQVCIRVMQEQ
LAQLAASLRRPEFGAPGLPGRPGPPGAPGPAGENGFPGQLGPRGLPGLKGPPGEIGRKGP
KGEPGERGERGFPGRGLKGYPGPRGLPGEPGKASYGREGRDGDRGPPGVAGQPGVPGPPG
PPGPPGYCEPASCRVQAGQRAGKNMKGP
NT seq 2787 nt   +upstreamnt  +downstreamnt
atgaaaagctactggaaaattacagctttcttttacctgtgtagttttctgtggtctttc
atctcagccaccatccagcaccaatcaagactgccagttattctgggtgccagtcacagg
attgatatctgcccaacaatcagaattggtcaagatgacttaccaggctttgacctgatt
tctcagtttcaaatagaaaaagctgcttcccaaggaattattgagagagtagtgggatcc
acttctctacaagtagcttataaattgggacccaatgtagacttcaggataccaaccagt
gccatatattccaacggattgcctgatgaatattccttcctaactacttttcggatgact
ggggccacacttcagaaatactggactatttggcagattcaggattcttcaggaaaagaa
caagttggagtgaatctcaatggccaaatgaaaagtgttgagttttcttataaaggagca
gatggaaaacaccaaacggcatcatttttacatttgcctttcttgtttgactcccaatgg
cacaagcttatgataattgtggaatcaaacagtgtcacactttttattgactgtattaaa
atagagtccttaaacataaaaccaaaagggaaaatcaacactgatggctttgctgtgctt
ggaaaacttaaaaataatcctcaaatttcagttccgttcgagatccagtggatggtgatc
cactgcgaccccctgcgaccccagcgcgaaggctgcggcgagctgccggctcgggtgaga
gacctgtcctgccctgtcctgtccacctctgcagtccacgaaagaggtccccctggtcca
ccaggccccccaggtccaccagggccaccaggagttcccggtattgatggcattgatggg
gagagaggcccaaagggtccccctggtccaccgggtccggatggggatgcaggcaaacca
ggatcccctggcttgcctggagagccgggagctgatggattcacaggacctgacggctca
cggggagctccaggaccaaaaggacagaagggggagccaggactgccaggtgttcgtgga
ctgccaggcaaggggcttcttggaccacctggtccagctggtgcagcaggacttcccggg
gaagtaggtcgtgctggtccacctggagatccaggaaaaagagggccaccagggctacca
ggacctccaggtcctccagggacaattggtcttcaagatggcgacgtgttgtgtcccagt
gcttgtcctcctggccgcccaggacatgctggcttaatgggtatgaaggggcaaaaaggt
tcaaaaggagagtctggtgaaccaggaaaacaaggttataagggtgaagaaggggaccaa
ggacccagtggtgaagtgggagctcaaggccctccaggcattctaggtatcagaggtata
actggtataatgggacctaaaggtaccaaaggagctcgtggtcttgatggtgatcctggt
ccccaaggtcttcctggtgcacctggggatcaaggacagagaggtccactaggagaggca
ggtccaaagggagaaaggggtcctcaaggtacaagagggatcaatggcctccctgggcct
aaaggagagcctggcttaccaggagttgatggccgtgaagggatccctggaatgcctgga
gctaaaggtgaaccaggaaaacctggagctccaggtgatacagggctccagggattgcca
ggtttcccaggctctccaggtatgaaaggcattcctggcccaaagggtaataaaggtcct
cctggggtgccagggttaatgggaaatcctggtaaacagggtcaacagggcccagaggga
gaagcaggtccaacgggaccccgaggaccaccaggtagcagaggggagacgggtcctgca
ggtcccccaggtttaccagggaagttgggtccccagggtaatattggacttcctggactg
cctggtcctccaggccttcctggtggtaaaggtgaccggggttcggtgggtgaaccagga
cctaagggtgaacaaggtgcacctggagcagaaggagatggaggagaaaagggtgactta
ggtgacatgggattaccaggagcaaagggagctgttggtaatcctggagaccctggttcc
cgtgggcctgagggaagtcggggactgcctggcatggaagggccacgaggctcacctgga
ccacgaggcttgcctggtgagcagggtgccccgggcctgcctggcagtgaaggtccagct
gggaaagaaccaagcgatcagcacattaagcaggtttgcataagagtcatgcaagaacaa
ttagctcagctggcagccagccttaggaggccagaatttggtgctccaggtcttcctggc
cgaccagggccaccaggtgctccaggacctgctggtgaaaatggtttcccaggacagctt
ggcccccgtggcctgcctggccttaaaggtccccctggtgagattgggcgtaaaggtcct
aaaggtgaaccaggagaaagaggtgaaagaggatttccaggcagaggactgaaaggttat
cctggaccaagaggtcttccaggtgaaccaggcaaggccagctacggcagggaaggccgt
gacggtgaccgaggtccccctggggtggccgggcagcctggggttcccggtccccctggc
cctcctggccctcccgggtactgcgagccggcgtcctgcagggtgcaggcgggacagaga
gcagggaagaacatgaaagggccctga

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