Chamaea fasciata (wrentit): 136288016
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Entry
136288016 CDS
T11360
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
cfai Chamaea fasciata (wrentit)
Pathway
cfai03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cfai00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
136288016 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfai03021
]
136288016 (SMARCA2)
03036 Chromosome and associated proteins [BR:
cfai03036
]
136288016 (SMARCA2)
Transcription machinery [BR:
cfai03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
136288016 (SMARCA2)
Chromosome and associated proteins [BR:
cfai03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
136288016 (SMARCA2)
Chromatin remodeling factors
BAF complex
136288016 (SMARCA2)
PBAF complex
136288016 (SMARCA2)
GBAF(ncBAF) complex
136288016 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
136288016
NCBI-ProteinID:
XP_066036802
LinkDB
All DBs
Position
Unknown
AA seq
1568 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMPTM
GPTDYPQEGMHQMHKSIDGLHEKGMVEDVHCGSMKSMRPPHPGMGPPQSPMDQHSQGYMS
PHPSPLGAPEHVSSPMSGGGPTPPQMTPSQPGPIIAGDPQVMNQPNRGPSPFSPAQLHQL
RAQILAYKMLARGQPLPENLQLAVQGKRTLPGIQQQQPPSAFNRQSGIGLHGMSATAAAP
GSAPGIPGHTTAITPKTWTEGQAPDMSVSNAQQKLPAPAPSGRPSPAPAAAQPAATLPGP
SVPQPPPGQPSPIVQLQQKQNRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLP
GSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLRE
ARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHA
NTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVW
EHKQAQAAKEKKKRRRRKKKAEENAEGMSSGLGPDGEPIDESSQMSDLPVKVTHTETGKV
LLGPEAPKASQLDAWLEMNPGYEVAPRSDSEDESGSEYEEEDEEEESSKLETDEKILLDP
NSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAITERVEKQSSLLINGTL
KHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLST
LSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIR
WKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFK
SCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEY
VIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQH
IEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMED
YFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVIIF
DSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMF
DQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRRED
ARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQ
WLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDSGKEDGEKAKKRRGRPPAEKLSPNPPKLT
KQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYR
SLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNDDEEE
DEEEESESESKSVKVKIKLNKKDEKGREKGKGKKRQSRAKAKPVVSDDDSDEDQDENDQS
EASGSDDE
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgcctacagaccctggcgccatgcctcatcctggtccttcccctggaccagga
ccttcacctggaccgattctgggacctagcccagggccagggccatctcctggctccgtt
cacagcatgatggggccgagtcctggtcctcccagtgtctcccatccaatgccgaccatg
gggcctacagattatccacaggaaggcatgcatcagatgcataagtctattgatggcttg
catgaaaaaggaatggttgaagatgttcactgtggctccatgaagagtatgcgacctcct
catcctggaatgggtccacctcagagtccaatggaccagcatagccaaggttatatgtct
ccacacccatctccactaggagcaccagagcatgtgtccagtccgatgtctggaggaggt
ccaacaccacctcagatgactcccagtcagccaggacccattatagcaggagacccacaa
gttatgaatcagccaaacagagggccttcccctttcagccctgcacagctgcatcagctg
cgggctcagattctggcatacaaaatgctggctagaggtcaacccttaccagagaacctc
cagcttgctgtccagggtaagaggaccctgcctggcattcagcagcagcagcctcccagt
gccttcaacagacagtctggtattggattacatggaatgagtgctactgcagctgcacca
gggtctgcaccggggatacctggacatacaactgccattactcctaaaacttggactgaa
ggccaagccccagatatgagtgtctccaatgcccaacagaagcttccagcaccagctcct
agtgggaggccttctccagctcctgctgctgcccaacctgctgccaccttgcctgggcct
tctgtaccacagcccccacctggacaaccttcacccattgtgcagctgcagcaaaagcag
aaccgcatcagccccatacagaagccacaggggctggatcctgttgaaatactccaagaa
cgtgaatataggcttcaggctcgcattgctcacagaatccaggaactggagaaccttcct
ggttctctgccccctgatctgcgaaccaaagctacagtggagctgaaggcacttaggtta
ctgaatttccaacgccagctaagacaggaggtggtggcctgcatgcgccgtgacacgacc
ctggagacagccctgaactccaaagcctacaaacggagcaagcgccagactttgagagag
gctcgcatgacagaaaagcttgaaaagcagcagaagatagaacaggagaggaagcgtagg
cagaagcaccaggaatacctgaacagcatattgcagcatgctaaagattttaaagagtac
caccggtcagtcgctgggaaaattcagaaactttctaaagctgtggcaacttggcatgcc
aacactgaacgtgagcagaagaaagaaactgagagaattgagaaagaaagaatgaggaga
ctaatggctgaagatgaagaaggttacagaaagctgattgatcaaaagaaagacagacgc
ctggcctacctgttgcagcagacagatgagtatgtggctaacttgactaacctggtgtgg
gagcataaacaggcacaagcagccaaagagaagaagaagcgaaggagaagaaagaagaaa
gctgaagaaaatgcagaaggaatgtcatctggtcttggtcccgatggagagcccatagat
gagagcagtcagatgagtgaccttccagtcaaagtgactcacactgaaacgggcaaagtt
cttcttggaccagaagcacccaaagcaagtcagctggatgcttggctggaaatgaaccct
ggctatgaagttgctcccagatcagatagtgaagatgaaagtggctctgaatatgaggag
gaggatgaggaagaagaatcaagcaaattagaaacagatgagaagatactcctggatcct
aacagtgaggaagtttctgagaaagatgcaaagcaaattattgagacagccaaacaagat
gtggatgatgaatacagcatgcagtatagtgctagagggtctcagtcctactacactgtt
gctcatgcaatcaccgagagggtggaaaagcagtcttcccttcttattaatggcacatta
aaacattatcagctccagggactggaatggatggtttctctctataataacaatctgaat
ggaattttagcagatgaaatgggactgggaaagacaatacagactattgctctcatcact
tacctgatggagcacaaaagactcaatggcccttatctcatcattgttcccttgtcgact
ttatccaattggacatacgaatttgacaaatgggctccttctgtagtgaagatatcctac
aagggtactcctgcgatgcgccgctcacttgttcctcagcttcgaagtggaaaatttaac
gttcttttgaccacttacgagtacataataaaggacaaacatatccttgctaagattcgg
tggaagtacatgatagtagatgagggccatcgaatgaagaaccatcactgcaagctgact
caggtcttgaacactcactatgtggcccctcggagaatcctgctgactgggactcctttg
cagaacaagctgcctgaactttgggctcttctcaatttccttcttccaaccattttcaag
agctgcagcacatttgagcagtggttcaatgctccgtttgccatgactggagaaagggtg
gacttaaatgaggaagaaactattctaatcatccgtcgtctccataaagtgcttcggccc
ttcttgctgagaagactgaagaaggaggttgaatctcaactgccagaaaaggtggaatat
gtgatcaaatgtgatatgtcagctcttcaaaagatcctgtaccgtcacatgcaagccaag
gggatacttctcacagatggttctgaaaaagacaagaagggaaaaggtggagcaaaaact
ctgatgaacactatcatgcaattgagaaagatatgcaatcacccgtacatgtttcaacac
attgaggagtcctttgctgaacatctgggctactcaaatggtgtcattaacggagctgaa
ctttatcgggcctcagggaagtttgagctactcgatcgtattctaccaaagttacgggct
accaaccatcgtgtgctccttttctgtcaaatgacatcactcatgaccattatggaggac
tactttgcctttagaaatttcctttacctgcgtctcgatggcacaacaaaatcagaggat
cgagctgctctgttgaagaagttcaatgaacctgggtcacagtactttatcttcttgctg
agtacaagggctggagggctaggcttaaatctccaggctgctgacaccgttataatcttt
gatagtgactggaatcctcatcaggatttgcaggcccaggatagagcccaccgaattggt
cagcagaatgaagtgagagtcctgagactgtgcactgtgaacagtgtggaggagaagata
cttgctgcagcaaagtataaactgaatgtagatcaaaaagttattcaggcaggaatgttt
gatcagaaatcttcaagccatgaaaggagagccttcctgcaagctatattggagcatgaa
gaagaaaatgaggaggaagatgaagttccggatgatgagacactgaatcagatgattgct
cgacgggaggaggaatttgatctctttatgcgcatggacatggatcgtcgcagggaggat
gccaggaaccctaaacgtaaacctcgcctgatggaggaggatgagttaccatcctggatt
attaaagatgatgctgaagttgaaaggcttacatgtgaagaagaagaagagaaaatattt
gggaggggatcccgtcagcgcagggatgtggactacagcgatgctctcacagagaagcag
tggctgcgggcaattgaagacggcaatttggaagaaatggaagaggaagtccggcttaaa
aagcgaaaaaggcgaagaaacgtggacaaggattctgggaaggaggatggagagaaagca
aagaaaaggagaggcagacctcctgcagagaagctgtcgcccaatccacccaaactgaca
aagcaaatgaatgctatcattgatactgtgataaactacaaggatagttcaggacggcag
ctaagtgaagtcttcattcagctcccgtctaggaaagaactaccagagtattatgaattg
attaggaagccagtggacttcaaaaagataaaggaaagaattcgcaaccataaatatcgg
agtcttggggatttagaaaaagacgtcatgctgctgtgtcacaatgcacagaccttcaac
ttggagggatctcagatctatgaggattccattgttcttcagtctgtgttcaaaagtgca
cgacagaagatagccaaagaagaagaaagtgaggatgaaagcaatgatgatgaagaagaa
gatgaagaagaggaatcggaatcagaatcgaaatcagtgaaagtcaaaatcaagttaaat
aagaaggatgaaaaaggtcgggagaaaggaaaaggcaagaagaggcaaagcagagcaaaa
gccaagcctgtcgtgagtgatgatgatagtgatgaggatcaagatgaaaatgaccagtcg
gaagcaagcggaagtgatgatgagtga
DBGET
integrated database retrieval system
