Chamaea fasciata (wrentit): 136288299
Help
Entry
136288299 CDS
T11360
Symbol
SOX17
Name
(RefSeq) transcription factor SOX-17
KO
K04495
transcription factor SOX17 (SOX group F)
Organism
cfai Chamaea fasciata (wrentit)
Pathway
cfai04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cfai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
136288299 (SOX17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cfai03000
]
136288299 (SOX17)
Transcription factors [BR:
cfai03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
136288299 (SOX17)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HMG_WDHD1
HTH_24
Motif
Other DBs
NCBI-GeneID:
136288299
NCBI-ProteinID:
XP_066037377
LinkDB
All DBs
Position
Unknown
AA seq
406 aa
AA seq
DB search
MSSPDAGYASSDDQVQGRCSLPIMMPAMCPWAESLSPLGEAKAKGGAAPSGPSGGRSKGE
ARIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALSLAEKRPFVEEAERLR
VQHMQDHPNYKYRPRRRKQVKRLKRVESGFLQHGLAEAATGPGLGSEVGGGGGRMCVEGL
GLPYGEQGYAAAAAGAGHYRDCPPLGAAFDGYGLPTPDPSPLDAAESEASFFAAGLQEEC
ALVPYGYGPHPAAAEYPAAAASESPSGASLRRHLPPGEALGAGGSLQALLGCPAPLHAYY
GQCQPPGPGRGPPPLPPPGAMGQPSPPPETAPCREQLEQLPPEELLGEVDRTEFEQYLRF
ACKPEPGLSFGGHEAAALASAEGAGPVSSVVSDASSAVYYCGYPDL
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccccgatgcgggctacgccagcagcgacgaccaggtgcagggccggtgctcg
ctgcccatcatgatgccggccatgtgcccgtgggcagagtcgctgagcccgctgggcgag
gcgaaggcgaagggcggcgcggcgccgtcggggccgtcgggcggccggagcaaaggcgag
gcgcggatccggcgtcccatgaacgccttcatggtgtgggcgaaggacgagcgcaagcgg
ctggcgcagcagaacccggacctgcacaacgccgagctcagcaagatgctgggtaaatcg
tggaaggcgctgtcgctggcggagaagcgtccgttcgtggaggaggcggagcggctgcgg
gtgcagcacatgcaggaccaccccaactacaagtaccggccgcggcggcggaagcaggtg
aagcggctgaagcgagtggagagcggcttcctgcagcacggcctggcggaggcggcgacg
gggcccgggctgggcagcgaggtcggcggcggcggcggcaggatgtgcgtggagggcctg
ggactgccgtacggcgagcagggctacgcggcggcggcggcgggcgcgggccactaccgg
gactgtccgccgctgggcgcggcgttcgacggctacggcctgccgacgccggacccgtcg
ccgctggacgcggcggagagcgaggcgtccttcttcgcggcggggctgcaggaggagtgc
gcgctggtgccctacggctacggcccgcacccggcggccgccgagtacccggcagcggcg
gcgtccgagagcccgtcgggcgcgtcgctgcggcggcacctgccgcccggggaggcgctg
ggcgcgggcgggtcgctgcaggcgctgctgggctgcccggctccgctgcacgcgtactac
gggcagtgccagccgccgggcccgggccgcggcccgccgccgctgccgccgcccggggcc
atggggcagccgtcgccgccgcccgagacggcgccgtgccgggagcagctggagcagctg
ccgcccgaggagctgctgggcgaggtggaccgcaccgagttcgaacagtacctgcgcttc
gcctgcaagcccgagccggggctgtcgttcggcggccacgaggcggccgcgctggcgtcg
gccgagggcgcgggtcccgtctcgtcggtcgtgtcggacgctagcagcgccgtctactac
tgcggctaccccgacttgtga
DBGET
integrated database retrieval system