Chamaea fasciata (wrentit): 136288405
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Entry
136288405 CDS
T11360
Symbol
NCBP1
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
cfai Chamaea fasciata (wrentit)
Pathway
cfai03013
Nucleocytoplasmic transport
cfai03015
mRNA surveillance pathway
cfai03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfai00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136288405 (NCBP1)
09122 Translation
03013 Nucleocytoplasmic transport
136288405 (NCBP1)
03015 mRNA surveillance pathway
136288405 (NCBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfai03019
]
136288405 (NCBP1)
03041 Spliceosome [BR:
cfai03041
]
136288405 (NCBP1)
Messenger RNA biogenesis [BR:
cfai03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
136288405 (NCBP1)
Spliceosome [BR:
cfai03041
]
Common components
Common spliceosomal components
Cap binding complex
136288405 (NCBP1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
Importin_rep_6
Motif
Other DBs
NCBI-GeneID:
136288405
NCBI-ProteinID:
XP_066037584
LinkDB
All DBs
Position
Unknown
AA seq
794 aa
AA seq
DB search
MSRRRHSDDSDGQPHKRRRTSEPSEIEERLESLICRVGEKSNSSLESNLEGLAGVLEADL
PNYKSKILRILCTVARLLPEKLTVYTTLVGLLNARNYNFGGEFVEAMIRQLKECLKVNMY
NEAVHLVRFLSDLVNCHVIAAPSMVAMFENFVGVTQEEDVPQVRCDWYMFAFLSSLPWVG
KELYEKKDAEMDRLLSQSESYLKRRQKIHVPMLQVWTADKPHPQEEYLDCLWSQIQKLKK
DRWQERHILRPYLAFDSVLCEALQHNLPPFTPPPHTEDSIYPMPRVIFRMFDYTDDPEGP
VMPGSHSVERFVIEENLHCIIKSHWKERKTCAAQLLSYPGNNKIPLNYHIVEVIFAELFQ
LPSPPHIEVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCVDRFINWFSHHL
SNFQFRWSWEDWSDCLTQDLEKPKPKFVREVLEKCMRLSYHQRIIDIVPASFSVLSPANP
VCIYKYGDESNRSLPGYTVALCLTIAIKNKASNDEIFSILKDVPNPNQDDDDGEGFTFNP
LKIEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVVYEVWKNHPQMI
AVLVDKMIRTQIVDCAAVANWIFSSELAHDFTRFYIWEILHSTIRKMNKHVLKIHKELEE
TKARLARQHKRRDSDDDDDDDDRSTDREDGPLEEQIERLQEKVESAQSEQKNLFLVIFQR
FIMLLTEHLVRCETGGIDVFTPWYKSCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDH
HILAVFQQFCALQA
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcggcggcacagcgacgacagcgatgggcagccccacaagagacggaggaca
tccgagccgtcagagatcgaggagaggctcgaatcgctcatctgcagggtgggagagaag
agtaattcgtcattggagagcaacctggagggcctagctggtgttttggaagctgatctg
ccaaattacaaaagcaagatactaagaatattgtgtactgttgcacgtctgctaccagaa
aagcttactgtttacacaacactggtggggttgctgaatgccaggaactacaattttggc
ggcgaatttgtagaagccatgattcgtcagcttaaagagtgtctgaaagttaacatgtat
aatgaagctgtgcatttagtacgttttctgtctgatctcgtgaattgtcatgtaatagct
gcaccttcaatggtagctatgtttgaaaactttgtgggtgtgacacaggaggaggacgta
ccccaggtgcgatgtgactggtatatgtttgcatttctgtcatctttgccttgggttgga
aaggagttatatgagaaaaaggatgctgaaatggatcgtctcttgtctcagtcagaaagt
tatctgaaacgccgccagaagattcatgttcccatgctgcaagtgtggactgctgacaaa
ccacatccacaagaagagtatttagactgcctttggtctcagattcagaaattgaaaaaa
gaccgttggcaagagcggcacatcctgaggccctacttggcttttgacagcgttctctgt
gaggcactgcagcacaatctgcctcccttcacacccccacctcacactgaagattctata
tacccgatgccaagggttatttttaggatgtttgactacacagatgaccctgagggtcct
gtcatgcctggcagccactccgttgagagatttgtaatagaggagaacctccactgcatc
atcaaatcccactggaaagagagaaagacttgtgctgcacagctgttgagctatccagga
aataacaagatccctttgaactaccatatagtagaggtaatatttgcagagttgtttcag
ctgccatctccaccacatattgaagtcatgtacacaacactcctgattgagctgtgcaaa
cttcagcctggctctttaccacaagttcttgcacaagccacagaaatgctctacatgcgt
ttggacacaatgaatacaacatgtgtggacagatttattaactggttttctcaccatttg
agcaactttcagttccgctggagctgggaagactggtcagattgtcttactcaggacctt
gaaaaacccaaacccaaatttgtgagagaggttctggaaaagtgcatgcgactctcctac
catcagcgaataatagacattgttcctgcaagtttttctgtcctcagtcctgctaatcca
gtgtgcatttacaaatatggagatgagagcaataggtctcttcctggatatactgtggca
ctctgtttaacaattgcaattaaaaataaggccagcaatgatgaaatcttcagtatttta
aaagatgtgcccaatccaaaccaggatgatgatgatggtgaaggatttactttcaaccct
ctgaaaatagaagtctttgttcagactctgctccatctagctgcaaagtcctttagccac
tccttcagcgccctggcaaagtttcatgaagtcttcaaaacacttgctgaaagtgatgag
gggaaacttcatgttctgagggttgtgtatgaggtttggaagaatcatccacagatgatt
gctgtgcttgtggacaagatgattcgaacacaaattgttgattgtgctgcagtagcaaac
tggatcttttcttcagagctggcacatgattttactaggttttatatctgggagatctta
cattccacaattcgtaagatgaataagcatgtcctgaagattcacaaagaactggaggag
actaaagcaagattggccaggcagcacaaaagacgagacagtgatgatgatgatgatgat
gacgaccgaagcaccgatcgggaagatggaccactagaggagcagatagagcgcttgcag
gaaaaagtagagtcagcccagagtgagcagaagaatctctttcttgttatattccagcgt
ttcattatgttgttaacggagcacttagtgcgctgtgagactggtggaattgatgtattt
acaccgtggtacaagagctgtatagagaggttgcagcagatcttcctgcagcaccaccag
ataatccagcagtacatggtgacacttgagaacctcctgtttacagccgaactggaccac
cacattctggctgtgtttcagcagttctgtgctctgcaggcctga
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