Chamaea fasciata (wrentit): 136291300
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Entry
136291300 CDS
T11360
Symbol
COL25A1
Name
(RefSeq) collagen alpha-1(XXV) chain
KO
K24356
collagen type XXV alpha
Organism
cfai Chamaea fasciata (wrentit)
Brite
KEGG Orthology (KO) [BR:
cfai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cfai00536
]
136291300 (COL25A1)
Glycosaminoglycan binding proteins [BR:
cfai00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
136291300 (COL25A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
136291300
NCBI-ProteinID:
XP_066042345
LinkDB
All DBs
Position
Unknown
AA seq
703 aa
AA seq
DB search
MGGGGKEIKAAAAEGCASTLGKSRGAAGQDGNGKPGGSGKPGLGKPGCGGDRCPRRAGPV
GSALAALLSALAAASCVYLGVRTSDLQARVAAIEGAQGGFSAAAPLPPLPGFSLEQLNAM
MQEKVERLLAQKSYEHLAKIRVAREAAPECNCPPGPPGKRGKRGRRGETGPPGQPGPQGP
PGPKGEKGDQGDQGPRGLPGFPTVAALHSNQILTVKGDQGQAGPPGPPGPPGPRGPPGDT
GKDGPRGMPGLTGEPGKPGEQGLTGPQGPPGQKGSVGVPGVPGRDGQVGEPGLPGIAGEK
GEAGLKGDPGERGEKGDAGENGLKGDTGEKGDPGSSAAGIKGEPGESGRPGQKGEPGLPG
LPGLPGIKGEPGFIGPQGEPGLPGLPGTKGDRGEAGPVGKGERGEPGIPGPKGDTGERGD
TGSAGPQGPPGQKGDQGATEIIDYNGNIHEALQGPPGPPGLQGLPGSKGEPGSPGTPGVD
GEQGPKGSKGDTGDPGMPGEKGGIGLPGLPGANGMKGEKGDVGLPGAQGPSMIGPPGPPG
PHGPPGPMGPHGLPGPKGEPGLNGLKGLKGEPGQKGDRGPLGLPGASGLDGKPGARGLDG
PVGPHGPAGPKGERGEKGTVGDPGPRGPYGLPGFPGPRGEKGDIGEKGEKGEKGKKGKKG
PKGEKGEQGAPGLDAPCPLGPDGLPMPGCWQKGVTPWLIAKKR
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggggggcggaggaaaggaaatcaaagctgccgcagctgaagggtgtgcgagcacgctg
gggaagagccgaggagccgcaggacaggatggcaacgggaagcccggcggcagcgggaag
cccggcctcgggaagcccggctgcggcggggaccgctgcccgcggcgggccgggccggtc
ggctccgcgctagccgcgctcctctcggcgctggccgcggcctcctgcgtctacctgggg
gtgcggaccagcgacctccaggccagggtcgcggccatcgaaggcgcccaagggggcttc
tctgccgccgccccgctcccgccgctgcccggcttttccttggagcagctgaacgcgatg
atgcaggagaaagtggagcgacttctcgcccagaaatcctacgagcacttggcaaaaata
cgagtagcgagagaagcggctccagagtgcaactgcccaccaggtcctccagggaaaaga
ggtaagcggggaagaagaggagagactggacctcctggtcagcctggtcctcaaggccct
cctggtccaaaaggcgagaagggagatcaaggtgatcagggccctcggggtctgccaggc
ttccccacagttgctgctctgcacagtaatcagatcctcaccgtcaagggggaccaagga
caggctggaccccctggacctccagggcccccaggacccagaggtcccccaggagacact
ggcaaggatggtcctcgtgggatgcctggcttaacgggtgagccaggaaaaccaggagaa
caaggattgacaggacctcaggggcctccaggacaaaagggttctgttggagtgcctggt
gttcccgggagagatggacaagtgggtgaacctggtttgccgggcatagcaggagagaag
ggagaagcggggctcaagggtgaccctggggaaagaggagaaaagggggatgctggcgag
aatggactgaagggtgacacaggagaaaagggtgaccctggctcttctgcggctggaatt
aagggtgaacctggtgaatctggacggcctggacaaaagggtgaaccaggccttcctggg
cttcctggactccctggaataaagggtgaaccaggtttcattggtccacaaggagaacct
gggttgccagggctaccaggaacaaagggtgacagaggagaggcaggccctgttgggaag
ggtgaacgaggtgaacctggaatccctggaccaaagggtgatacaggtgagagaggcgac
acaggatctgcaggtccacagggaccacctggacagaagggtgatcaaggtgcaacagag
atcattgattataatggcaatatccatgaagctctgcagggaccaccaggaccaccagga
ctccaagggctgccagggtcaaagggtgaaccaggatccccaggaactccaggagttgat
ggagagcagggtcctaagggctcaaaaggagacacaggtgatcctgggatgcctggagaa
aaagggggaattggactgcctggcctcccaggagccaatggcatgaaaggtgaaaaagga
gacgttggtttgcctggtgcccaaggtccctcaatgataggaccacctggaccaccagga
ccacatggtcctccaggccctatgggacctcatggactgcctggcccaaagggtgaacca
gggttaaatggtcttaaaggattgaagggtgaaccaggtcaaaagggtgacagagggccc
cttggtcttccaggagcatctggcttagacggaaagccaggagcccggggtttagatggc
ccagttggtccccatggccctgcaggtcccaaaggagagagaggtgagaagggaactgta
ggtgaccctggacccagaggaccatacggcttgcctggtttccctggtcctcgaggagaa
aagggtgatataggagaaaagggagaaaagggggaaaagggaaagaaaggcaaaaaaggg
cctaaaggggagaaaggagaacagggtgctcctggattagatgcaccttgcccattgggt
cctgatggattaccaatgcctggctgttggcagaagggagtcacaccatggctcattgct
aaaaagagataa
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