Chamaea fasciata (wrentit): 136292092
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Entry
136292092 CDS
T11360
Symbol
PATL1
Name
(RefSeq) protein PAT1 homolog 1 isoform X1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
cfai Chamaea fasciata (wrentit)
Pathway
cfai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
136292092 (PATL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfai03019
]
136292092 (PATL1)
Messenger RNA biogenesis [BR:
cfai03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
136292092 (PATL1)
mRNA degradation factors
5'-3' decay
Decapping complex
136292092 (PATL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
136292092
NCBI-ProteinID:
XP_066043446
LinkDB
All DBs
Position
Unknown
AA seq
764 aa
AA seq
DB search
MFRYPSLEDCPLDEDEDAFQALGEEDEDIDQFNDDTFGAGAVDDDWQEAHERLAELEDKG
GSSREPDGPVGNDGDVLGDPEDALAERLTRLVIDSELEDPAIMQAVHTREPPQQPGGLNS
SIWDSSAMLRRIRGPLLTQEMPSVSVLDYALPQRPPQARDEERDPSERALPRRSSSPIIG
SPPVRAVPIGTPPKQAAIPNFNQQILCPKPVHIRATMQQRYPAPYGERMSPNQLCSVPNS
SLLGHPFPHSVSPVLTHLQRAQLLGGAQAGRMSPSQFARVSGLVGSPLPSVNPKLLQGRV
GQMMSPAGGFRAFFGAPPAPPPSQLPHPPGPGSHMQNLRPQPQMFRPDTTHLHPQHRRLL
HQRQQQNRNQHRSLNGSGGDRGGHRSSHQEQIRKDPYANLMLQREKDWVSKIQMMQLQST
DPYLDDYYYQNYFQKLEKLAAAEEVHGDGPKKERTKLITPQVAKLEHTYKPVQFEGSLGK
LTVSSVNNPRKMIDAVVTSRSEDDETKEKQVRDKRRQTLVTIEKTYSLLLDVEDYERRYL
LSLEGERPALMGERKQKICDIYDNLRGKAPGQDRLSDDHFMQIMCIRKGKRLVARILPFL
APEQAADMLMATARNLPFLIKKDAQDEVLPCLLRPFSHVLYHLPLGTVTSLVQQLTNLPQ
SAAAPTNLHLTAVLQNKFGLSLLYLVLSRGEELQSSDTNTELMQDNQWTELMLMATRELL
RIPQGALAKPVSIPSNLISLFSRYVDQQKLNLLETKLHLVQGIR
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgttccggtacccgtccctggaggactgcccgctggacgaggatgaagatgccttccag
gccctcggggaggaggatgaagacatcgaccagttcaacgatgacacctttggggccggg
gccgtcgatgacgactggcaggaggcccacgagcggctggcggagctggaggacaagggc
ggctcgagccgggagccggacggtcccgttgggaatgacggggacgttctgggcgatccc
gaggacgcgctggccgagcggctcacgcggctcgtcatcgacagtgagctggaggaccca
gccatcatgcaggccgtgcacaccagggagcccccgcagcagcctggagggctgaattcc
agcatctgggacagttcagccatgctgcggcgcatccgggggccgctcctcactcaggag
atgccatcggtgtccgtgctggattatgccctgccccagaggcctccgcaggcacgggat
gaggagcgggatccatcggagcgggcgctgccccggcgctcctcgtcccccatcattggg
agccccccggtccgggctgttcccatcggcacccccccgaaacaggctgccatcccaaac
ttcaaccagcagatcctgtgtcccaagcctgtccacatccgagctaccatgcagcagcgt
tatcccgctccctatggagagaggatgtcccccaaccagctctgcagtgttccgaattcc
tccctcctgggccacccgttcccccacagcgtctctcccgttctcacacacctgcagaga
gcccagctgctcggaggagcccaggccggccgaatgtcccccagccagtttgcccgggtg
tcggggctggtagggagcccgctgccttctgtgaatcccaagctgctgcagggcagagtt
gggcagatgatgtccccggccggagggttccgtgcctttttcggggctccccccgccccg
cccccctcacagctgccgcaccctccgggccccggatcccacatgcagaacctgaggccg
cagccccagatgttccggccagacacgacccatctgcacccccagcaccgccggctcctg
caccagcggcagcagcagaaccggaaccagcaccggagcctcaatggctccgggggggac
cgagggggccaccggagcagccatcaggagcagatccgtaaggatccctacgccaacctc
atgctgcagcgggaaaaggactgggtgtccaagatccagatgatgcagctgcagagcact
gatccctacctggatgattattactatcagaattacttccagaagctggagaagttggca
gcagccgaggaagtgcacggtgatggtcccaagaaggagcgcactaaactcatcacccct
caggtggccaagctggaacacacctacaagccagtgcagtttgagggctcgctgggaaag
ctcactgtctccagcgtcaacaacccccggaagatgatcgatgccgtggtgacgtcccgc
agcgaggatgacgagacaaaggagaagcaggtccgggataagaggcgacagacccttgtc
acgatcgagaagacgtacagcctccttctggacgtggaggactacgagcgccgctacctc
ctgagcctggaaggggagcggccagccctgatgggagagaggaagcagaagatctgtgac
atttatgacaatctgaggggaaaggcacctgggcaggacaggctgagtgatgaccacttc
atgcagatcatgtgcatccggaaaggaaagcgcctggtggcccggatccttcccttcctg
gctccagagcaagcagctgacatgctcatggccacagccaggaacctgcccttcctcatc
aagaaggatgctcaggatgaggtgcttccctgcctcttgaggcccttttcccacgtcctc
taccatcttcccttgggaacagtcaccagccttgtgcagcagctcacaaacctacctcag
agcgccgccgctcccaccaacctgcacctcactgctgtgctccaaaacaagttcggtctg
tccctgctgtacctggtcctgagccgaggggaggaattgcagagctcagacacgaacacg
gagctgatgcaggacaaccaatggacggagctgatgctgatggcgacccgggagctcctg
cggatccctcagggagccttggcaaagcctgtgtccatcccctccaacttgatctccctc
ttctctcgctacgttgaccagcagaagctgaacctgctggagacaaaattgcacttagtg
caggggatccggtag
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integrated database retrieval system
