Chamaea fasciata (wrentit): 136293501
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Entry
136293501 CDS
T11360
Symbol
DDX18
Name
(RefSeq) ATP-dependent RNA helicase DDX18
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
cfai Chamaea fasciata (wrentit)
Brite
KEGG Orthology (KO) [BR:
cfai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cfai03041
]
136293501 (DDX18)
03009 Ribosome biogenesis [BR:
cfai03009
]
136293501 (DDX18)
Enzymes [BR:
cfai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
136293501 (DDX18)
Spliceosome [BR:
cfai03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
136293501 (DDX18)
Ribosome biogenesis [BR:
cfai03009
]
Eukaryotic type
90S particles
Helicases
136293501 (DDX18)
Pre-60S particles
136293501 (DDX18)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Claspin
Motif
Other DBs
NCBI-GeneID:
136293501
NCBI-ProteinID:
XP_066046430
LinkDB
All DBs
Position
Unknown
AA seq
648 aa
AA seq
DB search
MSVPAAASNLPMRLLRRKIHKRNLKLRQRNLKLRAAQGEVPSPSEGASQGPPEEEEVEEA
AVPEVAAAAEEGAEPADAAGPRSGEKKKKKKKKRKAVANGGDDTETKKPKTEEDESAEVE
DGQKQDSGEKEVDEEEEEDEVPSLPLGVTGAFEDNSFASLAGSVSENTLKGINDMGFTHM
TEIQHKSIKPLLEGRDILAAAKTGSGKTLAFLIPAVELIYKLKFMPRNGTGVIILSPTRE
LAMQTYGVLKELMNHHVHTYGLIMGGSNRSAEAQKLGNGINIIVATPGRLLDHMQNTPGF
MYKNLQCLVIDEADRILEVGFEEEMKQIIKLLPKRRQTMLFSATQTRKVEDLAKISLKKE
PLYVGVDDNKETATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVFFSSCMSVKYHY
ELLNYIDLPVLAIHGKQKQTKRTTTFFQFCNAESGILLCTDVAARGLDIPEVDWIVQYDP
PDDPKEYIHRVGRTARGINGRGHALLILRPEELGFLRYLKQARVPLSEFEFSWSKISDIQ
SQLEKLIEKNYFLHKSAQEAYKAYIRAYDSHSLKQIYDVNNLDLPKVSLSFGFKVPPFVD
LNVNSNHGRRLQKRGGGGGFGYQKSKNVHKAKIFKHISRKSDNRQFSR
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgccggctgctgccagcaacctgcccatgcggctgctccgcaggaagatccac
aagcgcaacctgaagctgcggcagcgcaacttgaagctgcgggcggcccagggggaagtg
ccctcgccgagcgaaggggcttctcagggacccccggaggaggaggaggtggaggaggcg
gcggtgccagaggtggctgccgcggccgaggagggcgcggagcctgcggatgcagccgga
ccccgcagcggggaaaagaagaaaaagaagaagaaaaagagaaaagcggtggccaatgga
ggagatgatacagaaaccaaaaaaccgaaaactgaagaagatgaatctgcagaggtagaa
gatggacaaaagcaggactctggagagaaagaagtggacgaggaggaggaggaagatgaa
gtgcccagtttgccactaggtgttacaggtgcttttgaagacaattcctttgcttccctg
gctggttctgtcagtgagaatacgttgaaaggcataaacgacatgggttttacacacatg
accgaaattcagcataaaagcattaagccccttctggaaggcagggatattttagcagct
gcaaaaacaggcagtggaaaaacacttgcgtttctcattcctgcagtggagctcatctac
aagctgaaattcatgcctaggaatggaacgggtgttattattctttctcctacccgagag
ctggctatgcaaacctatggtgttcttaaagaacttatgaatcatcatgttcacacctat
gggctgatcatggggggcagtaacagatcagcagaagcacagaagcttggaaatggaatc
aacatcattgtagcaacaccagggagactactggatcacatgcagaacactccaggtttc
atgtacaagaacttgcagtgtttggtaattgatgaggcagatcgaatcttggaggttgga
tttgaagaagaaatgaaacagatcataaaacttttaccaaagcgcaggcagacgatgctt
ttctctgccacacaaaccagaaaggtcgaagatctggcaaagatctctctgaagaaagag
ccactgtatgttggggttgatgataacaaggagacagcaacagtagatggtctggaacag
ggttatgtggtgtgtccatctgaaaaaagattccttttgctcttcacattcctcaagaag
aaccggaagaagaaactgatggtatttttttcttcttgtatgtcagtgaagtaccactat
gaattactcaactacattgatctgcctgttttggccattcatggcaagcagaaacagacc
aaacgtactacaacgtttttccagttctgtaatgcagagtctggaatactgctgtgcact
gatgtggctgccagaggattggacattcctgaggttgactggattgtccagtatgaccct
ccagatgatccaaaggaatatatccatcgtgttggtaggactgccagaggaataaatggt
agaggacatgctctgctcattttacgaccagaagaactgggcttccttcgttacctgaaa
caagccagggtaccactaagtgaatttgaattttcttggtcaaaaatctcagacatccag
tctcagctggaaaaactgatagagaagaactacttcctccacaagtcagcccaggaggct
tacaaagcttacatcagagcttacgactcccattctctgaagcagatctatgatgtcaat
aatctggatcttcccaaagtcagcctgtcatttggttttaaagttcctccatttgttgac
ctcaatgtgaacagcaaccatggcaggagactacagaaaagaggtggaggtgggggattt
ggctaccagaaatcaaagaacgtccacaaagcaaaaatcttcaaacacatcagcaggaaa
tctgacaatcggcagttttctcgttaa
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integrated database retrieval system
