Chamaea fasciata (wrentit): 136293918
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Entry
136293918 CDS
T11360
Symbol
EXOSC1
Name
(RefSeq) exosome complex component CSL4 isoform X1
KO
K07573
exosome complex component CSL4
Organism
cfai Chamaea fasciata (wrentit)
Pathway
cfai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cfai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
136293918 (EXOSC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfai03019
]
136293918 (EXOSC1)
Messenger RNA biogenesis [BR:
cfai03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
136293918 (EXOSC1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
136293918 (EXOSC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
S1_RRP4
Motif
Other DBs
NCBI-GeneID:
136293918
NCBI-ProteinID:
XP_066047183
LinkDB
All DBs
Position
Unknown
AA seq
216 aa
AA seq
DB search
MSRTGPAGSERGARSGPGPGMPRQPLSPCVAGERLCSTEEATAGSGTYTRHGFIFSSLAG
CLERKSEDNELPVVSVVRDSESQLLPNVGAVVTCKVCSINSRFAKVHILYVGSTPLKSTF
RGTIRREDIRATEKDKVEVYKSFRPSDIVLAKVISLGDAQSNYLLSTAENELGVVVARSE
AGVQMVPISWCEMQCPRTHTKEFRKVARVQPQFLQT
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcactgggccagctgggagcgagcgtggtgctcggagcggtccggggcccggg
atgccccggcagcccctgagcccctgtgtcgcaggtgagcggctctgcagcacagaggag
gccacggctggtagcgggacctacactcgtcacggcttcatcttctcctcgctggctggc
tgcctggagaggaagagtgaggacaacgagctgcccgtggtgtcggtggtgagagacagc
gagtcccaactcctgcccaacgtgggggctgtggtgacatgcaaggtctgcagtattaac
tctcgctttgccaaggtgcacatcctgtatgttggctccacgccgctgaaatccaccttc
cgaggcaccatacggagagaagatatccgagccacagagaaggataaggtagaagtgtac
aagagcttccgccccagtgacatcgtcctggccaaagttatctccctgggggacgcacag
tccaactacctgctgagcacagcagagaatgagctgggcgtggtggtggcacggagtgag
gcaggggtgcagatggtgcccatcagctggtgtgagatgcagtgcccacggacacacacc
aaggagttccgtaaggtggcccgggtgcagcctcagttcctgcagacgtaa
DBGET
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