Chamaea fasciata (wrentit): 136298901
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Entry
136298901 CDS
T11360
Symbol
THOC5
Name
(RefSeq) THO complex subunit 5 homolog isoform X1
KO
K13174
THO complex subunit 5
Organism
cfai Chamaea fasciata (wrentit)
Pathway
cfai03013
Nucleocytoplasmic transport
cfai03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfai00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136298901 (THOC5)
09122 Translation
03013 Nucleocytoplasmic transport
136298901 (THOC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfai03019
]
136298901 (THOC5)
03041 Spliceosome [BR:
cfai03041
]
136298901 (THOC5)
Messenger RNA biogenesis [BR:
cfai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
136298901 (THOC5)
Spliceosome [BR:
cfai03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
136298901 (THOC5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
136298901
NCBI-ProteinID:
XP_066056100
LinkDB
All DBs
Position
Unknown
AA seq
710 aa
AA seq
DB search
MSSESSKKRKPKVIRTDGVPAEGKRGKGDTDQETQTLLWRVSTKLEDPSGICMVPSNPPD
VRYYSEESEVDLRDPIKDYELYRETCQELQRLMAEIQELKSRGIKENASEIDERRVQSCV
HFMTLKKLNRLAHIRLKKGRDQTHEAKQKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSK
HEEIELVSLEEFYKEAPPEISRPAITLTEPHQQTLARLDWELEQRKRLAEKYKECLTSKE
KILKEIEVKKEYLSSLQPRLNSIMQASLPVQEYLFMPFDQAHKQYETARHLPPPLYVLFV
QASAYGQACDKKLVVAIEGSVEEAKALYKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQL
DDKRKEMLKRHPLSVTLDLKCKDENVLHLTFYYLMNLNVMTVKAKVTTAVEMTTAISAGD
LLSPDSLLNCLYPGDHGRKTPNPANQFQFDKVGILTLSDYVTELGHPYVWVQKLGGLHFP
KDQPQHTVAADNSLSASHMELTVKLLRSRLQSRLALHKQFASLEHGVVPVSSECQQLFPT
KIVSRLVKWTAIPYEDYAELPYTKDVIEAGLAEDTHLYYMALIERGTAKLQAAVVLNPGY
STLPPVFSLCLNWKGERNSSNDDNIRAMESEVNVYYKELWGPKPGYQLLTNQLQRLCMVL
DVYLETEPHDPSVEGPKEFPQEKMCLRLVRGPLRLKPFKFNYPQGFFSHR
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccgagtccagcaagaagaggaagcccaaggtgatccgcacggacggggtccca
gccgagggcaagcggggcaagggcgacacggaccaggagacacaaacactcctctggaga
gtgagcacaaagctggaagatccctcagggatttgcatggtgccttcaaaccctcccgat
gtcaggtactacagcgaggagagcgaggtggatctgcgcgaccccatcaaggactacgag
ctctacagggagacctgccaggagctccagaggctcatggcagagatccaggagctgaag
agccggggcatcaaggaaaatgcctcggagatcgacgagcggcgcgtgcagagctgcgtg
cacttcatgaccctgaagaaactgaaccgcctggctcacatccggctgaagaaaggcagg
gaccagacccacgaggcaaagcagaaggtcgatgcctatcacctgcagctccagaacctg
ctctatgaggtgatgcacctgcagaaagagatcaccaagtgcctggagttcaaatccaaa
cacgaggagatcgagctggtgagcttggaggagttctacaaagaggccccccctgaaatc
agccgccctgccatcaccctgaccgagccccaccagcagaccctggcccgcctggactgg
gagctggagcagcgcaagaggctggctgagaagtacaaggagtgcctgaccagcaaggag
aagatcctgaaggagatcgaggtgaagaaggaatatctgagtagcctccagcctcggctc
aacagcatcatgcaggcctccctgcctgtccaggagtacctgttcatgccctttgaccag
gcccacaagcagtacgagaccgcccggcacctcccgcctcctctctacgtcctcttcgtc
caagccagcgcctatggacaggcctgtgataagaagcttgtggtggccattgaagggagc
gtggaggaagccaaagccctttataagccacctgaggactcgcaggatgatgagagcgat
tccgacgcagaggaggagcaaaccacgaagcggcgcaggcccaccctgggcgtgcagctg
gacgacaaacgcaaggagatgctgaaacgacaccccttgtccgtcaccctcgacctgaag
tgcaaagatgagaacgtgcttcacctgaccttctactacctgatgaacctcaatgtcatg
acagtgaaagccaaggtgaccactgctgtggagatgaccacggccatcagtgctggggac
ctgctctccccagactccctcctcaactgcctctatccaggggaccacgggaggaaaacg
cccaacccggccaaccagttccagttcgataaagtgggcatcctgaccctgagtgactac
gtgacagagctgggacacccctacgtgtgggtgcagaagctgggcggcctgcatttcccc
aaggatcagcctcagcacacggtggctgctgacaattccctgagtgccagccacatggag
ctgacagtgaagctgctccggagccgcctgcagtcccgcctggccctgcacaagcagttt
gcatcccttgagcacggtgttgtgcccgtgtccagcgagtgccagcagctcttccccacc
aaaatcgtctcgcgcctggtgaagtggactgccattccctatgaggattatgctgaactg
ccttacactaaggatgtgatagaggctggcttggctgaagacactcacctctactacatg
gccctgatagagaggggaacagccaagctccaggcggctgtggtgctgaatcccggttat
tccacgctgcctcccgtcttcagcctgtgcctgaactggaagggagagcggaacagcagc
aacgacgacaacattcgggccatggagagtgaggtcaatgtctactacaaggagctgtgg
gggcccaaacccggctaccagctcctcaccaaccagctgcagcgcctgtgcatggtgctg
gacgtgtacctggagacagagccccacgatcccagcgtggaggggcccaaggagttcccc
caggagaagatgtgtctgcgcctggtcaggggccccctgcgcctgaagcccttcaagttc
aactacccccaggggttcttcagccatcgctga
DBGET
integrated database retrieval system
