Chamaea fasciata (wrentit): 136299358
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Entry
136299358 CDS
T11360
Symbol
ALYREF
Name
(RefSeq) THO complex subunit 4
KO
K12881
THO complex subunit 4
Organism
cfai Chamaea fasciata (wrentit)
Pathway
cfai03013
Nucleocytoplasmic transport
cfai03015
mRNA surveillance pathway
cfai03040
Spliceosome
cfai05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cfai00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136299358 (ALYREF)
09122 Translation
03013 Nucleocytoplasmic transport
136299358 (ALYREF)
03015 mRNA surveillance pathway
136299358 (ALYREF)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
136299358 (ALYREF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfai03019
]
136299358 (ALYREF)
03041 Spliceosome [BR:
cfai03041
]
136299358 (ALYREF)
Messenger RNA biogenesis [BR:
cfai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
136299358 (ALYREF)
TREX complex
136299358 (ALYREF)
Spliceosome [BR:
cfai03041
]
Complex C
Other components
EJC/TREX
136299358 (ALYREF)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
136299358 (ALYREF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
F07F6_N
Motif
Other DBs
NCBI-GeneID:
136299358
NCBI-ProteinID:
XP_066056992
LinkDB
All DBs
Position
Unknown
AA seq
254 aa
AA seq
DB search
MADKMDMSLDDIIKLNRSQRGATRGGRGGRGRGGTARGGGPGRGGVGGGRAGGGPVRNRP
VMARGGGRNRPAPYSRPKQLPEKWQHDLFDSGFGAGAGVETGGKLLVSNLDFGVSDADIQ
ELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTS
QIDTQRRPAQSVNRGGMTRNRGVSGGFGGGGNRRGTRGGNRGRGRGAGRTSKQQLSAEEL
DAQLDAYNARMDTS
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaagatggacatgtccctggacgacatcattaagctgaaccggagccagcgt
ggggccacccggggcggccggggcggccgaggccggggcggcaccgcacgcgggggcggg
cccggccggggcggcgtgggcggcgggcgcgcgggcggcggccccgtgcggaaccggccg
gtgatggcccggggcggcggtaggaaccggcccgcgccctacagccggccgaaacaactc
cccgagaagtggcagcacgacctgttcgacagcggctttggggcgggggccggagtggag
accggcgggaagctgctcgtctccaacttggatttcggcgtttcggatgcggacatccag
gagctctttgcggagttcgggaccttgaagaaggcggctgtgcactatgacagatccggg
cgcagcctagggacggcggacgtgcattttgagcggaaggccgacgcgctgaaggccatg
aagcagtacaacggggtccccttggatgggcgccccatgaacatccagctggtgacgtca
cagattgacacgcagcggagaccagcacagagtgtaaacagaggtggcatgaccagaaac
cgtggggtctcggggggatttggaggtggaggcaacaggcgagggactcgtggtgggaac
agagggagaggcagaggagctggaagaacttccaaacagcagctctctgcagaagaacta
gatgcacagctggatgcttacaatgccaggatggacaccagctaa
DBGET
integrated database retrieval system
