Chamaea fasciata (wrentit): 136299442
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Entry
136299442 CDS
T11360
Symbol
TNC
Name
(RefSeq) tenascin isoform X1
KO
K06252
tenascin
Organism
cfai Chamaea fasciata (wrentit)
Pathway
cfai04510
Focal adhesion
cfai04512
ECM-receptor interaction
cfai04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
cfai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
136299442 (TNC)
04518 Integrin signaling
136299442 (TNC)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
136299442 (TNC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cfai00536
]
136299442 (TNC)
Glycosaminoglycan binding proteins [BR:
cfai00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
136299442 (TNC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_TEN
fn3
Fibrinogen_C
EGF_Teneurin
EGF_2
EGF_Tenascin
FN3_DSCAM-DSCAML_C
Fn3_Dep-1_3rd
Fn3_PBP1
Fn3_Dep-1_2nd
Pur_ac_phosph_N
DUF7949
EGF
Interfer-bind
NDNF
EGF_PEAR1L
hEGF
Fn3_R-PTP-O
SPE9_EGF_3rd
EGF_TGFA-like
Big_5
Motif
Other DBs
NCBI-GeneID:
136299442
NCBI-ProteinID:
XP_066057154
LinkDB
All DBs
Position
Unknown
AA seq
1594 aa
AA seq
DB search
MGLPSRVLACAILALLSQHAAGGLIKRIIRQKRETGLNVTLPEDNQPVVFNHVYNIKLPV
GSLCSVDLDSASGEADLKAEIEPVKNYEEHTVNEGNQIVFTHRINIPRRACGCAAAPDIK
DLLSRLEELEGLVSSLREQCASGAGCCPNSQAVEGRLDTTPYCSGHGNYSIEICGCVCEP
GWKGPNCSQASCPSDCNDQGKCVDGLCVCFEGYTGPDCGQELCAQGCGAHGSCVGGRCLC
HEGFVGDDCSVPLCPHNCHGHGRCVDSECVCDEGYTGEDCSELICPNDCYDRGRCVNGTC
FCEEGFTGEDCGEFTCPNDCHGQGRCENGLCVCYEGFVGDDCSQRRCPSDCHNRGRCVGG
RCVCHEGYLGEDCGELRCPNDCHNRGRCENGQCVCHEGFIGEDCGELRCPNDCHHRGRCE
NGLCVCHEGFTGEDCGQLRCPNDCHNRGLCVNGQCVCDEGYTGEDCGELRCPDDCHNRGR
CVEGRCECDNGFTGEDCGELACPNDCHGRGRCVDGRCVCHEGFVGEDCRERSCPNNCNNV
GRCVDGHCVCEDGYIGDDCSDVSPPTELTVTNVTDKTVNLEWKHENLVNQYLVTYVPTSS
GGLDMNFTVPGNATAATIHELEPGVEYFIRVFAILKNKKSIPVSARVATYLPAPEGLRFK
SVRETSVQVEWDPVNFSFDGWELVFHNMKKDDNGDITSSLKRPETSYMQPGLAPGQQYNV
SIHIVKNNTRGPGLSKVITTKLDAPSQVEAKDVTDTTALITWSKPLAEVESVELIYGPKD
TPGDRTSIGLSEDENQYSIGNLRPHTEYEVTLVSRRGDMESDPVKEVFVTDLDAPRNLKR
VSQTDNSITLEWKNSHANVDNYRIKFAPISGGDHVEITVPKGSQATTRATLTGLRPGTEY
GIGVTAVRNDRESAPATINAGTDLDNPKELEVSEPTETTLSLRWRRPVAKFDRYRLVYTG
PGGKRSEVEIPVDSTSFLLRGLDPGTEYTISLQAEKGRHKSKPTTVKGSTEAEPEVDNLL
VSDATPDGFRLSWTADDGVFNSFVLKVRDTKRKSDPLELIVPGHERTQDITGLKEGTEYE
IELYGVGSGQRSQPVNAVASTVVGSPKGISFSDITENAATVSWIPPRSRVENFRISYVPV
TGGTPNVITVEGSKTRTKLVKLVPGVDYNVSIISVKGFEESEPVSGTLKTALDSPSGLVV
VNITDSEALATWQPAIAAVDNYVVSYSSETEPEVTQMVSGNTVEYDLQGLQPATEYTLSI
HAQKDAQRSETLSTHFTTGLDAPRDLSATEVQSEAAVISWRPPRAPVTEYLLIYESTDGR
VKELVLNPEPTSYSLTELSPSTQYTVKLQALSGALRSKTIQTIFTTTGLLYPYPKDCSQA
LLNGEATSGLYTIYLNGDKAQPLQVFCDMGEDGGGWIVFLRRQNGKQDFYKNWNTYVAGF
GDPKDEFWIGLENLHKITSQGQYELRVDLRDKGDVAYAVYDRFSVGDAKSRYRLRVDGYS
GTAGDSMTYHNGRSFSTFDKDHDSAITNCALSYKGAFWYKNCHRVNLMGRYGDNSHSQGV
NWFHWKGHEYSIEFAEMKLRPSSFRNLEGRRKRA
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atgggactccccagccgggtcttggcctgtgccatcctcgctttgctgtcccagcacgcc
gctgggggactcatcaagagaattatccggcagaagagggagactgggctgaacgtgacc
ttgccagaggacaaccagcctgtggttttcaaccatgtctacaacataaagctgcccgtt
ggctccctctgctctgtggacctggactcggccagcggcgaggccgacctgaaggcggaa
attgagcctgtcaagaattacgaggagcacacggtgaatgagggcaaccagattgtcttc
actcacaggattaacattccccgccgggcttgtggctgtgcagctgccccagacattaag
gatctgctgagcagactagaggagctggaggggctggtctcctccctgcgggagcagtgt
gccagtggggctggatgctgtcctaattcccaggcagtagaaggccgcctggacaccacg
ccctactgcagcgggcacggcaactacagcatcgagatctgcggctgcgtctgtgagcct
ggctggaagggccccaactgcagccaggcttcgtgtccctccgactgcaacgaccagggc
aaatgtgtggacgggctgtgcgtgtgcttcgagggttacacaggcccagactgcggccag
gagctctgcgcccagggttgcggcgcccacgggagctgcgtgggcgggcggtgcctgtgc
catgagggctttgtgggcgacgactgcagcgtgcccctgtgcccccacaactgccacggc
cacgggcgctgcgtggacagcgagtgcgtgtgcgacgagggctacaccggcgaggactgc
agcgagctcatctgccccaacgactgctacgaccgcgggcgctgcgtgaacggcacctgc
ttctgtgaggaaggcttcaccggcgaggactgcggggagttcacctgccccaacgactgc
catggccagggccgctgcgagaacggactgtgcgtgtgctatgaaggctttgtgggtgat
gactgcagccagaggaggtgccccagcgactgccacaaccgcgggcgctgcgtgggcggg
cgctgcgtgtgccacgaggggtacctgggtgaggactgcggggagctgcggtgtcccaat
gactgccacaaccgcgggcgctgcgagaacgggcagtgcgtgtgccacgagggcttcatc
ggggaggactgcggggagctgcgctgccccaacgactgccaccaccgtgggcgctgcgag
aacgggctgtgcgtgtgccatgagggcttcaccggggaggactgtggccagctgaggtgt
cccaacgactgccacaaccgcgggctgtgcgtcaacgggcagtgcgtgtgcgatgagggg
tacacgggtgaggactgcggggagctgcggtgtcccgacgactgccacaaccgcgggcgc
tgcgtggaggggcgctgcgagtgtgacaacggcttcacgggcgaggactgcggcgagctg
gcctgtcccaatgactgccacgggcgtgggcgctgcgtggacgggcgctgcgtgtgccac
gagggctttgtgggtgaggactgccgcgagcgctcctgccccaacaactgcaacaacgtg
gggcgctgcgtggacgggcactgtgtctgcgaggatggctacattggggacgactgctct
gatgtgtctcctccaactgaactgactgtgaccaacgtgacggataaaactgtcaatctg
gagtggaaacatgagaacctcgtcaaccagtacctggtcacctatgtccccaccagcagt
gggggcttggacatgaattttactgtgccaggaaacgccacagccgccaccatccatgag
ctggagccgggcgtggagtacttcatccgtgtctttgcaatcctcaaaaacaagaagagt
attccagtcagcgccagggtggccacatatctgcctgctccagaaggtctgagattcaaa
tctgtccgggaaacatccgtccaggtggagtgggaccccgtgaacttctctttcgatggc
tgggagctggtcttccataatatgaaaaaggatgacaatggtgacataaccagcagcttg
aaaaggccagagacatcctacatgcagccaggtttggcacctgggcaacagtacaatgtg
tccatccatatagtgaagaacaacaccagaggaccaggactgtccaaagtcatcaccaca
aagcttgatgcccccagccaggtggaggccaaggatgtcaccgacaccacggctctcatc
acatggtccaaacccttggctgaagttgaaagcgtggagctcatttatggccccaaggac
actccaggggacaggaccagcattggcctctctgaagatgagaaccaatattccattggc
aacctgaggccgcacacagagtacgaggtgacgcttgtctcccgccgaggggacatggaa
agcgaccctgtgaaggaagtctttgtcacagacctggatgctcccaggaacctgaagcgg
gtgtcccagactgacaacagcatcaccctggagtggaagaacagccacgccaatgtcgat
aattacagaatcaagtttgctcccatctctggtggggaccacgtggagatcacagtgccc
aagggcagccaggccacaaccagagctaccctcacaggtttgaggcctggaactgaatat
ggcattggagtgacagcagtgaggaacgacagggaaagtgctcctgctaccatcaatgct
ggcactgatcttgacaaccccaaggagctggaggtgagcgagcccacggagaccacgctg
tccctgcgctggaggaggccggtggccaagttcgaccgctaccgcctggtgtacacgggg
cccgggggcaagaggagcgaggtggagatccctgtggacagcacctccttcctgctgcgg
gggctggacccaggcaccgagtacaccatcagcctgcaggcagagaagggcaggcacaag
agcaaacccaccactgtgaagggttccacggaagcagaacccgaggtcgacaacctcctg
gtttcagacgcgactccagatggattccgtctctcctggactgcagatgacggggttttc
aacagctttgttctaaaagtcagggacaccaaaaggaaatctgaccctctggagctgata
gtgccaggccatgagcgcacccaggatataacagggctgaaggagggcactgaatatgag
attgagctctatggagttggcagtggacaacgttcccagcccgtaaacgcagtagcatcc
acagtggttggctctcccaagggaatttccttctctgacatcacggaaaatgctgccaca
gtcagctggatcccccctcgctcccgcgtggaaaacttccgcatctcctacgtccccgtc
acgggaggtactccaaatgttatcacagtggaagggagcaagacaaggaccaagctggtg
aagttggtcccaggtgtggactacaatgtcagcatcatctctgtgaaaggctttgaagaa
agcgagcccgtctctggcaccctgaaaacagctctggacagcccgtcaggcctggtagtg
gtgaacatcacagactccgaggctctggcaacttggcagccagcaattgctgctgtggat
aactacgtggtgtcctactcctctgagacagagcctgaagtgacgcagatggtgtcgggg
aacacggtggagtacgacctgcaggggctgcagcccgccacggagtacacgctgagcatc
cacgcccagaaggacgcgcagaggagcgagaccctctccacacacttcaccacagggctg
gatgctccgagggatttgagtgccactgaggtgcagtcagaggcagctgtgataagctgg
aggcctccccgtgctccagtcactgaatatctcctgatctatgaatccactgatggcaga
gtcaaggaactcgtcctaaaccctgagccaacgtcctacagcctgacagagctgagcccc
tccacgcagtacacggtgaaactgcaggccctgagtggggccctgaggagcaaaaccatc
cagaccattttcaccaccactgggctcctctatccctaccccaaggactgctcccaggcc
ctgctgaatggagaagccacctctgggctctacacaatttacctgaatggggacaaggct
cagcctctgcaagtgttctgtgacatgggcgaggacgggggtggatggatcgtgttcctg
aggcgtcagaatggaaagcaagatttctacaagaactggaatacttatgtggcagggttt
ggagatcctaaggatgaattctggataggtctggagaacctgcacaagatcacttcccag
gggcagtatgagctgcgggtggacctgcgggacaagggggacgtggcctacgccgtgtac
gatcgcttcagcgtgggcgacgccaagagccggtaccggctgcgcgtggacggctacagc
ggcacggcaggtgactccatgacctaccacaatggaaggtccttctccacctttgacaag
gaccacgactctgccatcaccaactgtgctctgtcatacaaaggagctttctggtacaag
aactgtcaccgagtcaacctgatgggcagatacggtgacaacagccacagtcagggcgtc
aactggttccactggaagggccacgagtattccatcgagtttgccgagatgaagctgaga
ccctccagcttccggaacctggaggggcggcggaagcgagcgtag
DBGET
integrated database retrieval system
