Chamaea fasciata (wrentit): 136299772
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Entry
136299772 CDS
T11360
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
cfai Chamaea fasciata (wrentit)
Pathway
cfai03030
DNA replication
cfai03420
Nucleotide excision repair
cfai03430
Mismatch repair
cfai03440
Homologous recombination
cfai03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cfai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
136299772 (RPA1)
03420 Nucleotide excision repair
136299772 (RPA1)
03430 Mismatch repair
136299772 (RPA1)
03440 Homologous recombination
136299772 (RPA1)
03460 Fanconi anemia pathway
136299772 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cfai03000
]
136299772 (RPA1)
03032 DNA replication proteins [BR:
cfai03032
]
136299772 (RPA1)
03400 DNA repair and recombination proteins [BR:
cfai03400
]
136299772 (RPA1)
Transcription factors [BR:
cfai03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
136299772 (RPA1)
DNA replication proteins [BR:
cfai03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
136299772 (RPA1)
DNA repair and recombination proteins [BR:
cfai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
136299772 (RPA1)
MMR (mismatch excision repair)
136299772 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
136299772 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
136299772
NCBI-ProteinID:
XP_066057795
LinkDB
All DBs
Position
Unknown
AA seq
613 aa
AA seq
DB search
MSVRLSEGAIAAIMQGEEVSKPVLQVINTRAIATGTGPPRYRVLMSDGVNTLSSFMLATQ
LNSLVEEERLAARCICQVNRFIVNSLKDGRRVVILMDVNVLQTADQVAGPIGNPQPYNEG
QGQRSAAPAGNSAASKPQQQNGNLSGAGPAAPKYHAPSNQFGKASAPSALKTPGGSQAKV
VPIASLNPYQSKWTICARVTQKGQIRTWSNSRGEGKLFSIELVDESGEIRATAFNDQADK
FFPLLELNKVYYFTKGNLKTANKQYTAVKNDYEITFTNETSVVPCDDAQHLPSVQFDFVS
ISELENTPKDSIVDVIGICKSYEDVTKITVKANNREVSKRNVHLMDTSGKLVTATLWGNE
AEQFDGSRQPVIAIKGARVSDFGGRSLSVLSSSTVVVNPDSPEAFKLRGWFDSEGQHLEC
ASISDVRGGPAAGANTNWKTLFEAKSENLGQGDKADYFSCVGTIVHLRKENSMYQACPSQ
DCNKKVIDQQNGLYRCEKCDREFPNFKYRLMLLITIADCLEYQWVTCFQDTAEFILGQNA
AFLGELKEKNEQAFEEVFQNANFNTYEFRIRVKLETYNDESRIKATAMDVKPVNYREYSK
RLIANIRRNAQLG
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgcggctgagcgaaggggccatcgcggccataatgcaaggcgaggaagtctcc
aagcccgtgctgcaagtcatcaacacacgagctattgccaccggaactgggcccccacgt
taccgagtgctgatgagtgatggggtgaacaccctctcctcattcatgttggcaacacag
ctgaactccctggtggaagaggaacgcctggcagcccggtgtatttgccaggttaacaga
ttcattgtcaacagcctgaaagatggaaggagagtggttatcctgatggatgtaaatgtc
ctgcaaactgctgatcaggttgctgggcctattggcaatccccagccatacaatgaagga
caagggcaacgttctgcagctccagcaggaaactcagcagccagcaaaccccagcaacaa
aatggcaatttatctggagcaggtcctgctgctcccaagtaccatgctccctccaaccag
tttggaaaagcgagtgctcccagtgccctgaagacacctggggggtctcaggccaaagtg
gtgccaattgccagcttgaatccataccagtccaagtggaccatttgtgctcgggttacc
caaaaaggtcagatccgcacgtggagcaactcccgtggtgaaggaaagctcttttccata
gagctggttgatgaaagtggtgagattagagctactgcattcaacgatcaagcagacaag
ttctttccactccttgaattgaacaaggtatattattttaccaaaggcaatttgaagact
gctaacaagcaatatacagctgttaagaatgactatgagattacattcactaatgagact
tcagttgtgccctgtgatgatgcccagcatcttccatctgttcagtttgattttgtatcc
atctctgagttggagaacacgcccaaagactcgattgttgatgtaattggaatttgcaag
agctacgaagatgtcactaaaattacagtgaaagctaacaatagggaggtttcaaagagg
aacgtgcatctgatggatacatcagggaaactggtgacagctacgctgtggggaaatgag
gctgaacagtttgatggttccagacaacctgtgattgccatcaaaggagcccgtgtctct
gactttggtggcagaagcctgtctgtcctgtcctccagcacagttgtcgtcaaccctgat
agcccagaggctttcaagctccgaggatggtttgactccgaggggcagcatctggaatgt
gcctccatctctgatgtgaggggtgggccagcagctggagcaaataccaattggaaaact
ttgtttgaagccaaatctgagaacttgggacagggagataaggcagattattttagctgt
gtgggcacaattgtacatctgcgcaaagagaacagcatgtaccaggcatgtccctctcag
gattgcaacaagaaagtgatagaccagcaaaatggactttaccgctgcgagaagtgtgac
cgcgaattccccaacttcaagtaccgcctgatgctcctgattaccattgcggactgtctg
gaatatcagtgggtgacttgtttccaagacacagcagagttcattcttgggcaaaacgca
gctttcctgggagaactgaaggaaaagaacgagcaggcttttgaagaagtgttccaaaac
gcaaacttcaacacctatgagttcaggatccgagtgaaactggaaacttacaacgacgag
tctcgtattaaggccacagcaatggacgtcaaacccgtgaactacagggaatacagcaag
aggttgattgccaacatcaggagaaatgctcagctggggtga
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