Chamaea fasciata (wrentit): 136300040
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Entry
136300040 CDS
T11360
Symbol
PRPF8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
cfai Chamaea fasciata (wrentit)
Pathway
cfai03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cfai00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136300040 (PRPF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cfai03041
]
136300040 (PRPF8)
Spliceosome [BR:
cfai03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
136300040 (PRPF8)
Complex C
U5 SnRNP specific factors
136300040 (PRPF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
136300040
NCBI-ProteinID:
XP_066058236
LinkDB
All DBs
Position
Unknown
AA seq
2335 aa
AA seq
DB search
MAAVFPYRGGCAPVPNPLAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYIAQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLKDNRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATE
VAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
GQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKVMADNPSWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQGSWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgtgttcccgtaccgcggcggctgcgccccggtgcccaacccgctggcgccg
ctgcccgactacatgtccgaggagaagctgcaggagaaagcccgcaagtggcagcagctg
caggccaagcgctatgcggagaagaggaaattcggcttcgtggacgcgcagaaggaggac
atgccccccgagcatgtccgcaaaatcatccgcgaccacggcgacatgaccaataggaag
ttccggcacgacaagcgcgtctacctgggagctctgaagtacatgccccatgctgtgctg
aagctcctggagaacatgcccatgccctgggagcagatccgggatgttcccgtcctgtat
cacatcactggcgccatctcctttgtcaacgagatcccctgggtcatcgagcctgtctac
attgcccagtggggctccatgtggattatgatgaggcgggagaagagagacaggcgtcac
ttcaagaggatgagattccccccgtttgatgatgaagaaccccctctggattatgctgat
aacatcctggatgtggagcccctggaagccattcaactggagttggatccagaggaggat
gcccctgtgctggactggttctatgaccaccagcctctgaaggacaacaggaagtatgtc
aacggctccacgtaccagcgctggcagttcaccctgcccatgatgtccaccctgtaccgc
ctggccaaccagctgcttactgacctggtggatgacaactacttctatctgtttgacctg
aaagccttcttcacctccaaggcactcaacatggccattcctggtggtcccaagtttgag
cccctcgtcagagacatcaatcttcaggatgaagactggaatgaatttaatgacatcaac
aaaatcattatcaggcagcccatcaggacagagtacaaaatcgctttcccgtacctgtac
aacaacctgccacaccatgtccacctcacctggtatcatactccaaatgttgttttcatt
aaaacagaagatcctgatctcccagctttttactttgatcctctgatcaaccccatttca
cacagacattctgtcaagagccaggaaccactgcctgatgatgatgaggagtttgagttg
ccagagtttgtggagcctttcctgaaggatacccctctctacactgataacacagccaat
ggcattgccttgctgtgggccccacgacccttcaatttgaggtctggcaggacccggaga
gctcttgacatcccactggtcaagaactggtaccgtgagcactgcccagcaggacagccg
gtcaaggtgagagtctcctaccagaagctcctgaagtactatgtcctgaatgcactcaaa
cacagacctcccaaggcccagaagaagaggtacctgttccgctccttcaaggctaccaag
tttttccagtcgaccaagctggactgggtggaagttggcctgcaagtgtgtcgccagggc
tacaacatgctgaacttgctgatccacagaaagaacctgaattaccttcacttggattac
aacttcaacctgaagcctgtgaagaccctcaccacaaaggaaagaaaaaaatcccgtttt
gggaacgccttccatctgtgccgagaggtcctgcggctgactaagctggtggtggacagc
cacgtccagtacagactgggaaatgtggatgcatttcagctggcagatggcctgcagtac
atctttgcccacgtgggtcagctcacagggatgtaccggtacaagtacaaactgatgagg
caaatccgaatgtgcaaagacctgaaacatctcatctactacaggtttaacacggggcct
gtgggcaaaggtcctggctgtggtttctgggctccaggctggagagtgtggctgttcttc
atgaggggcatcaccccgctgctggaacgctggctggggaatctgctggccaggcagttt
gaaggccgtcactcgaagggtgtcgcaaagactgtcacgaagcagcgcgtggagtctcac
tttgacctggagctgagggcagctgtgatgcacgacatcctggacatgatgccagaaggg
atcaagcagaacaaagccagaaccatcctgcagcacctgagcgaggcttggcggtgctgg
aaggccaatattccctggaaggtgccagggctgccaactcctattgagaacatgatcctg
aggtacgtgaaggccaaagctgactggtggacaaacacagctcactacaaccgggagcgc
atccgccgcggagccactgttgacaaaaccgtctgtaagaagaacctgggcaggctgacc
agactctacctgaaagctgagcaggaacggcagcataattacctgaaggatgggccttac
atcactgcagaagaggccgttgctgtgtacacaaccacagtgcactggctggagagcagg
aggttctcccccattcccttccccccactgtcctacaagcatgacaccaagctgctgatc
ttagccctggagaggctgaaggaagcttacagtgtgaaatcacgcctgaatcagtcacag
agagaggagctgggcttgattgagcaggcttacgataatccccatgaagctctgtccaga
atcaagcgacatctgttgactcagagagccttcaaggaggtgggaattgagttcatggat
ctctacagccacttggtccctgtttatgatgttgagcccctggagaagatcacagatgct
tatttggatcagtacttgtggtatgaggctgataaacgaagacttttccctccttggatc
aaacccgctgacactgaaccacccccactgctggtgtacaagtggtgccaaggcattaat
aacctgcaggatgtttgggaaacaagcgaaggggaatgcaacgtgatgctggaatctcgg
tttgagaagatgtatgagaagattgacctgaccttgctcaacaggctgctgcgtctcatc
gttgatcacaacattgctgactacatgacagccaagaacaacgtggtgatcaactacaag
gacatgaatcacacaaactcctacgggattattcgtgggctgcagtttgcttccttcatt
gtccagtactatgggcttgtgatggacctgctggtgctgggcctgcacagggccagtgag
atggctgggcctccccagatgccaaatgacttcctcagcttccaggacattgccacggag
gtggcccatcccattcgcctcttctgcagatacattgacaggattcacatcttcttcagg
ttcacagctgacgaggcaagagacctgatccagaggtacctgacagagcacccagacccc
aacaacgagaacattgtgggctacaacaacaagaagtgctggcctcgggacgctcgcatg
cgcctcatgaagcacgacgtgaaccttggccgtgctgtattctgggatatcaagaaccgt
ttgccccgctcggtgaccacggtgcagtgggagaacagcttcgtgtccgtgtacagcaag
gacaacccgaacctgctgttcaacatgtgcggcttcgagtgccgcatcctgcccaagtgc
cgcaccagctacgaggagttcacacacaaggacggggtctggaacctgcagaacgaggtc
accaaggagcgcacggctcagtgcttcctgcgtgtggatgatgagtccatgcagaggttt
cacaacagagtgaggcagatcctcatggcctctggctccacaaccttcactaagattgtc
aataagtggaacacagctctgattggcttgatgacttatttccgggaagctgttgtaaat
actcaggagctgctggatttgctggtgaagtgtgagaataaaatccagactcggatcaag
atcggcctgaattccaaaatgcccagccgttttcctcctgtggtgttctacacccctaag
gagctgggggggctgggcatgctctccatgggccacgttctcatccctcagtctgacctg
aggtggtccaagcagacagatgttggcatcactcacttccgctcaggaatgagtcatgag
gaggaccagctcatcccaaatctgtatcgttacatccagccatgggagagtgaattcatt
gactctcagagggtgtgggcagagtatgccctgaaacgacaggaggctatagcccagaac
aggcgtctgacactggaggatctggaggactcgtgggacaggggaatccctcggattaac
acccttttccagaaggaccggcatacactggcttatgacaaaggatggagagtcaggact
gacttcaaacagtatcaggtgctgaagcagaacccgttctggtggacacaccagcgccac
gatggcaaactctggaacctgaacaattaccgcacggacatgatccaggctctgggcggg
gtggaagggatcctggagcacacgctcttcaagggcacctacttccccacgtgggagggt
ctcttctgggagaaggccagtggctttgaggagtccatgaaatggaagaagctgacaaat
gcccagagatcgggtttgaaccaaattccaaacagaaggttcactctctggtggtctcct
accattaacagggccaatgtgtatgttggcttccaggtgcagctggatctgacagggatc
ttcatgcatggcaaaatccccacgctgaagatttccctcatccagattttccgagctcac
ttgtggcagaagatccacgagagcattgtcatggatttgtgtcaggtgtttgatcaagag
ctggatgctctggagattgagacagtgcagaaagagacaatccatcccaggaagtcctac
aagatgaattcctcatgtgcagatatccttctctttgcttcctacaagtggaatgtgtca
cgtccatccttgctggcagattccaaggatgtgatggacagcaccaccacccagaagtac
tggattgacatccagctgcgctggggcgactacgactcccatgacattgagcgctacgcc
agggccaagttcctggactacaccacagacaacatgagcatctacccctctcccactggg
gtgctcattgccatcgatctggcctacaacttgcacagtgcttatgggaactggttccct
gggagcaaacctctgatccagcaggccatggccaaaatcatgaaagcaaaccctgccctg
tatgtgttgagggaacgaatccgcaaagggctgcagctctactcctcagagcccacagaa
ccctacctgtcctcccagaactatggggagctcttctccaaccagatcatctggtttgtg
gatgacaccaacgtgtacagagtcaccatccacaagacttttgaagggaatttgaccaca
aagcccatcaatggagccattttcatcttcaatcccagaactggacagctcttcctgaag
atcatccacacatctgtgtgggcaggacagaaacgtctgggacagctggccaagtggaag
actgctgaagaagtggctgccttgatccgatcccttcccgtggaggagcagccgaagcag
atcatagtgacacggaagggcatgctggacccacttgaggtgcacttgctggatttcccc
aatattgtgatcaaaggctcggagttgcagctacccttccaggcctgtctgaaagtggag
aagtttggtgatctcatcctgaaggccactgagccccagatggttctcttcaatctctat
gatgactggctgaaaaccatctcttcctacacagccttctcccgtctgatcctgattctc
cgggcgctgcacgtgaataacgatcgagccaaagttatcctgaagccagacaagacaacc
atcactgagcctcaccacatctggccaaccctaactgatgaggagtggatcaaggtggag
gtgcagctaaaggatctcatccttgctgactatggcaagaagaacaacgtgaacgttgca
tccctgacccagtcagagatccgagacatcatcctgggcatggagatctctgccccatct
cagcagaggcagcagattgcagaaattgagaagcaaaccaaggagcagtcgcagctgacg
gccacacagacccgcacggtgaacaaacacggggatgaaatcatcacctccaccaccagc
aactacgaaacccagaccttctcctccaagactgagtggagggtcagagccatttctgcc
gccaacctccacctgcggacaaaccacatctatgtctcatcagatgacataaaggagaca
ggttacacctacattcttcccaaaaatgtgttgaagaagttcatctgcatctcagacctg
cgggcccagattgcaggttacctgtatggagtgagccctccagacaacccccaggtgaag
gagatccggtgcattgtgatggtgccccagtgggggacacaccagaccgtgcacctccca
gggcagctgccacagcacgagtatctcaaggaaatggaacctctgggatggattcacacc
caaccaaacgagtcccctcagctctcaccacaggatgtcaccacccacgccaaggtcatg
gctgacaacccctcctgggatggggagaagaccatcatcatcacctgcagttttacccct
ggctcctgcacgctgacagcctacaaactgaccccgagcgggtacgagtggggccggcag
aacacggacaaagggaacaaccccaagggttacctcccctcccactatgagagggtgcag
atgctcctgtccgaccgtttcctcggcttcttcatggtcccagcacagggctcctggaac
tacaacttcatgggtgtccgccacgaccccaacatgaagtacgagctgcaactcgccaac
cccaaggagttttaccacgaggtccatcgcccctctcacttcctcaacttcgcgctgctg
caggagggggaggtttactctgccgaccgcgaggatctctacgcctaa
DBGET
integrated database retrieval system
