Chamaea fasciata (wrentit): 136303999
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Entry
136303999 CDS
T11360
Symbol
SMARCA4
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
cfai Chamaea fasciata (wrentit)
Pathway
cfai03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cfai00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
136303999 (SMARCA4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfai03021
]
136303999 (SMARCA4)
03036 Chromosome and associated proteins [BR:
cfai03036
]
136303999 (SMARCA4)
Transcription machinery [BR:
cfai03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
136303999 (SMARCA4)
Chromosome and associated proteins [BR:
cfai03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
136303999 (SMARCA4)
Chromatin remodeling factors
BAF complex
136303999 (SMARCA4)
PBAF complex
136303999 (SMARCA4)
GBAF(ncBAF) complex
136303999 (SMARCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
DUF2009
Motif
Other DBs
NCBI-GeneID:
136303999
NCBI-ProteinID:
XP_066063754
LinkDB
All DBs
Position
Unknown
AA seq
1610 aa
AA seq
DB search
MATPEPPLGGTPRPGPSPGPGPSPGSMLGPSPGPSPGSGHSGHALPAPGYTPDTIHPLHK
PLDPMHEKGMSEDPRYGQMKGMGMRPGGHAGMGPPPSPMDQHSQGYPSPLGSSEHASSPV
PSNGPSSGSTGGSGAALDGSGSDSPALGRGPSPFNAAQLHQLRAQIMAYKLLARGQPLPE
HLQVAVQGKRPLPGMQPQIPALPPPAGATQGPGQAPGAGPAPPGYSRPHGIGGPNMPPPG
PSGVPPGMPGQPPGGPPKPWPEGPLSAAAPGGAPQKLLPPPPAGRPSPVPPAVPPASPGP
PPPSPGQPAPPALPIHPKQNRITPIQKPRGLDPVEILQEREYRLQARIAHRIQELENLPG
SLAGDLRTKATIELKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREA
RITEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVSGKIQKLTKAVATYHAN
TEREQKKENERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRQ
HKAAQVAKEKKKKKKKKKAENAEGQAPAIGPDGEPLDETSQMSDLPVKVIHVESGKILTG
TDAPKAGQLEAWLEMNPGYEVAPRSDSEESGSEEEEEEEEEEQPQPAQPALPVEEKKKIP
DPDSDDVSEVDARHIIENAKQDVDDEYGVSQALARGLQSYYAVAHAVTERVDKQSALMVN
GVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVP
LSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILA
KIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPT
IFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEK
VEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYM
FQHIEESFSEHLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTI
MEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTV
IIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQA
GMFDQKSSSHERRAFLQAILEHEEQDESRQSAGSGSFPHAASSLCLGAESEEAPLKEEDE
VPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWILKDDAEVE
RLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKR
EPEGPAGPPPSARSRDKDEESRKQKKRGRPPAEKLSPNPPPLTRKMRKIVDAVIKYKDSS
SGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNA
QTFNLEGSLIYEDSIVLQSVFTSVRQKVEKEEESDGEESEEEEEGEEEGSESEARSVKVK
IRLGRKEKVPERGKGRRRGARGGRPKPLLSDDESEDEQEEDRSGSGTEDD
NT seq
4833 nt
NT seq
+upstream
nt +downstream
nt
atggcgactccggagcctccactgggagggaccccccggcccggcccctctcctggtccg
ggcccttccccgggatctatgctgggcccctctcccggcccttcgcctgggtctggacac
tcgggacacgcgctcccggctccaggatacaccccggacaccatccaccccctgcacaag
cccctggatccaatgcacgagaagggaatgtcggaagatccgcgctacgggcagatgaag
ggaatgggaatgcggccgggggggcatgcaggaatgggccccccccccagccccatggat
cagcattcccaaggttatccatcccctctgggtagctcggagcacgcctccagcccagtg
ccatccaacggcccctccagcggctctacgggtggctctggcgcggcgctggatggctct
ggctcggactcaccggcgctgggccggggcccgtccccgttcaacgcggcgcagctgcac
cagctccgtgcccagatcatggcctacaagctgctggcacgggggcagccgctcccggag
cacctccaggttgccgtccagggaaagcggccgctgcctgggatgcagccgcagattcct
gctctacctccacccgccggtgccacgcagggcccgggacaagcacccggagcggggcca
gcgccacccgggtattccagacctcatggaataggagggcccaacatgccccctcccgga
ccctcaggagttccccccggcatgccggggcagccccccgggggcccccccaagccctgg
ccagaagggccactgtcagcggcggcaccaggcggggccccccagaagctgctgccacca
ccccctgcgggccgcccctcgcccgtgcccccggccgtgccgccggcatcccctgggccc
ccgccgccctcgccggggcagccggcaccgcccgcgctcccgatccatcccaaacagaac
cggatcacccccatccagaaaccccgcggcctcgaccccgttgagatcctgcaggagcgc
gagtacaggctccaagcccgcatcgcccaccgcatccaagagctggaaaaccttcccggc
tccttggccggagacctgcggaccaaagcaactatcgagctcaaggctctgcggctgctc
aacttccagcgccagctgcggcaggaggtggtggtgtgcatgcggcgggacacggcgctg
gagacggcgctcaatgccaaggcgtacaagcgcagcaagcggcagtcattacgtgaggcc
cggatcacagagaagctggagaagcagcagaagatcgagcaggagcggaagcgccggcag
aagcaccaggaatatctcaacagcatcctgcagcatgccaaggacttcaaggaataccac
cggagcgtgagtgggaagatccagaagctgaccaaggcggtggccacataccacgccaac
actgagcgcgagcagaagaaggagaacgagcgcatcgagaaggagcggatgcgccggctc
atggcagaggatgaggagggctaccggaagctcatcgaccagaagaaggacaagcgcctg
gcctacctgctgcagcagacagacgagtacgtggccaacctaacagagctcgtgcggcag
cacaaggcagcccaggtggccaaggagaagaagaagaagaaaaagaagaagaaggcagag
aatgctgagggacaggctccagccatcggcccggatggggagccactggatgagacaagc
cagatgagtgacctcccggtgaaggtgatccatgtggagagtgggaagatcctcactggc
accgatgctcccaaggccgggcagctcgaggcctggctggaaatgaaccctgggtacgag
gtggctccacgctccgacagcgaggagagtggctcggaggaggaggaggaggaggaggaa
gaggagcagccacagccggcacagccagcgctacctgtggaggagaagaagaagattcca
gacccagacagcgacgatgtctcagaagtggatgcccgacacatcatcgagaacgccaag
caggacgtggatgacgagtacggggtgtcgcaggcactggcgcggggcctccagtcctac
tacgccgtggctcacgctgtgaccgaacgtgtggacaagcagtcagccctgatggtcaat
ggcgtcctcaagcagtaccagatcaaaggcctggaatggctcgtgtccctgtacaacaac
aacctcaatgggatcctggcagatgagatgggattggggaaaaccatccagaccatcgcc
ctcatcacgtacctcatggagcacaagcggatcaacggccccttcctcatcatcgtcccg
ctctcgactttgtccaactgggcctacgagtttgacaaatgggctccttccgtagtcaag
gtctcctacaagggctctccagcggcacgacgcgccttcgtcccacagctccggagtgga
aaattcaacgttctgctcacaacgtacgagtacatcatcaaggacaagcacatcctggcc
aagatccgctggaagtacatgatcgtggatgaggggcaccggatgaagaaccaccactgc
aaactgacgcaggtgctcaacacccactatgtggccccacggcggctgctcctcactggg
accccactccagaacaagctcccggagctctgggcactcctcaacttcctgctcccaacc
atcttcaagagctgcagcacctttgagcagtggttcaacgcaccatttgccatgactggg
gagaaggtggacctgaacgaggaggagacaatccttattatccgccgcctgcacaaagtg
ctccggcccttcctgctccggcgactcaagaaggaggtggaagctcagctcccggaaaag
gtcgagtatgtgatcaagtgcgatatgtcggcgctgcagcgggtcctgtaccggcacatg
caggccaagggtgttctcctcactgacggctccgagaaggacaagaaggggaaaggtggc
acgaagacgctgatgaacacaatcatgcagctgcgcaagatctgcaaccacccctacatg
ttccagcacatcgaggaatccttctcggagcacttggggttcacaggcgggatcgtgcag
gggctggatttataccgtgcctctgggaagttcgagctcctggaccggatcctgcccaag
ctccgggccaccaaccacaaggtgctgctcttctgccagatgacctcccttatgaccatc
atggaagattattttgcttaccgtggctttaaatacctcaggctggatgggaccacgaag
gcagaggaccggggaatgttgctgaagaccttcaacgagccaggctctgagtatttcatc
ttcctgctgagcacgcgggccgggggcctgggcctcaacctccagtcggccgacactgtc
atcatctttgacagcgactggaacccacaccaggacctgcaggcccaggaccgggcccac
cgcatcgggcagcagaacgaggtccgcgtgctccggctctgcaccgtcaacagtgtggag
gagaagatcctggcggctgccaagtacaagctcaacgtggaccagaaggtgatccaggcc
ggaatgttcgaccagaaatcctccagccacgagcgccgggcgttccttcaggccatcctg
gagcacgaggagcaggatgagagcagacagagcgcgggcagtggcagcttcccccacgct
gcctcctccctgtgcctgggcgctgagtcggaggaagcacctctaaaggaggaggacgag
gtgcccgatgacgagaccgtgaatcagatgatcgcccggcatgaggaggagttcgacctg
ttcatgcgcatggacctggaccggcggagggaggaggcgcggaatcccaaacggaagccg
cggctgatggaggaggacgagctcccgtcctggatcctgaaggacgatgccgaggtggag
cgactcacctgcgaggaagaggaggagaagatgtttggccgcggctcccggcaccgcaag
gaagtggattacagtgattccctcacagaaaaacaatggctcaaggccatcgaggagggg
acactggaggagatcgaggaggaagtccggcagaagaaatcctctcggaagcggaagcgg
gagcccgagggtcccgcaggcccccccccaagtgcccggagccgggacaaggacgaagag
agccggaagcagaagaagcgggggcggcctccggctgaaaaactatccccaaatccgccc
cccctcacccggaaaatgcggaaaatcgtggatgctgtcatcaagtacaaggacagcagc
agcgggcggcagctgagcgaggttttcatccagctcccgtcccgcaaggagctgccagaa
tactacgagctcatccggaaacctgtggacttcaaaaagatcaaggagcggatccgaaac
cacaagtaccggagcctcaacgacctggagaaggacgtgatgctgctgtgccagaacgcc
cagaccttcaacctggaggggtccctgatctatgaggattcaattgtgctccagtccgtg
ttcaccagtgtccggcagaaggtggaaaaggaggaggaaagcgatggagaggagagcgag
gaggaggaggagggagaggaggaaggatccgagtctgaggcccgctcggtgaaggtgaag
atccgtctgggccgaaaggagaaggttccagagcgtgggaagggccggcgccggggagcg
cgggggggccgccccaaacccctcctgagtgacgacgagagcgaggacgagcaggaggag
gatcgctccggcagtggcaccgaggatgactga
DBGET
integrated database retrieval system
