Chamaea fasciata (wrentit): 136305563
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Entry
136305563 CDS
T11360
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
cfai Chamaea fasciata (wrentit)
Pathway
cfai03020
RNA polymerase
cfai03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cfai00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
136305563
09124 Replication and repair
03420 Nucleotide excision repair
136305563
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfai03021
]
136305563
03400 DNA repair and recombination proteins [BR:
cfai03400
]
136305563
Enzymes [BR:
cfai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
136305563
Transcription machinery [BR:
cfai03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
136305563
DNA repair and recombination proteins [BR:
cfai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
136305563
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
136305563
NCBI-ProteinID:
XP_066064934
LinkDB
All DBs
Position
Unknown
AA seq
1969 aa
AA seq
DB search
MHGGPPSGDSACPLRTIKRVQFGILSPDEMKRMSVTEGGIKYPETTEGGRPKLGGLMDPR
QGVIERTGRCQTCAGNMTECPGHFGHIELAKPVFHVGFLGKTMKILRCVCFFCSKLLVDS
NNPKIKDILGKSKGQPKKRLTHVYDLCKGKNICEGGEEMDHKFGVEQPEGDEDLTKEKGH
GGCGRYQPRIRRSGLELYAEWKHVNEDSQEKKILLSPERVHEIFKRISDEECFVLGMDPK
FARPEWMVCTVLPVPPLSVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQNGAAAH
VIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVDF
SARTVITPDPNLAIDQVGVPRSIAANMTFAEIVTPFNIDRLQELVRRGNSQYPGAKYIIR
DNGDRIDLRFHPKPSDLHLQIGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWST
FRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDT
LTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHIN
CIRTHSTHPDDEDSGPYKHISPGDTKVIVENGELIMGILCKKSLGTSAGSLVHISYLEMG
HDTTRLFYSNIQTVINNWLLIEGHTIGIGDSIADAKTYQDIQNTIKKAKQDVIEVIEKAH
NNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKINI
SQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHAM
GGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGESV
EFQNLATLKPSNKAFEKKFKFDYTNERALRRTLQEELVKDILSNAHIQNELEREFDRMRE
DREVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFHINSRLPSDLHPVKVVEGVKELSRKLV
IVNGEDPLSRQAQENATLLFNIHLRSTLCSRRMVEEFRLSGEAFDWLLGEIESKFNQAIA
HPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTV
FLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQSTVVAEDQEWVNVYYEMPD
FDVSRISPWLLRVELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRI
MNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKII
ITEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALERE
LYHVISFDGSYVNYRHLALLCDTMTSRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLME
AAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKHGMEIPSALPGLGVGGPTGM
FFGSAPSPMGGMSPAMTPWNQGATPAYGAWSPSVGSGMTPGGAGFSPSAASDASGFSPGY
SPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPS
YSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT
SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY
SPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTS
PSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYS
PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSP
KYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDDDN
NT seq
5910 nt
NT seq
+upstream
nt +downstream
nt
atgcacggcgggccgccctcgggcgacagcgcctgcccgctgcgcaccatcaaacgagtc
cagttcggcatcctgagccccgatgagatgaaaaggatgtcggtgaccgaggggggcatc
aagtaccccgagaccaccgagggggggcgccccaaacttggggggctcatggacccccgg
cagggcgtcatcgagaggacgggccgctgccagacctgtgcagggaacatgacggagtgc
ccgggtcactttggtcacatcgagctggccaagcccgtgttccacgtcggctttttgggg
aaaaccatgaaaatcctgcgctgcgtctgcttcttctgctccaagctgctggtggactcg
aacaaccccaagatcaaggacatcctgggcaagtccaaggggcagcccaagaagcggctg
acgcacgtctacgacctgtgcaagggcaagaacatctgcgagggcggcgaggagatggac
cacaagttcggggtggagcagcccgagggggacgaggatctcaccaaggagaagggccac
ggcggctgcgggcggtaccagccgcgcatccggcgctcgggcctggagctctacgccgag
tggaaacacgtcaacgaggactcccaggagaagaagatcctgctgagccccgagcgcgtg
cacgagatcttcaagcgcatctcggacgaggaatgcttcgtgctgggcatggaccccaag
ttcgcccggcccgagtggatggtgtgcaccgtgctgcccgtgccgccgctctccgtgcgc
ccggccgtggtcatgcagggctccgcccgcaaccaggacgacctgacccacaagctggcc
gacatcgtcaagatcaacaaccagctgcggcgcaacgagcagaacggggcggccgcgcac
gtcatcgccgaggacgtcaagctgctgcagttccacgtggccaccatggtggacaacgag
ctgcccggcctgcccagggccatgcagaagtcggggcgccccttgaagtcgctgaagcag
cggctgaaggggaaggagggccgggtccgcgggaacctgatggggaaacgcgtggatttc
tccgcccgcaccgtcatcacccccgaccccaacctggccatcgaccaggtgggagtgccc
cgctccatcgccgccaacatgaccttcgccgagatcgtcacccccttcaacatcgacagg
ctgcaggagctggtgcgcagggggaacagccagtacccgggcgccaagtacatcatcagg
gacaacggcgaccggatcgacctgcgcttccaccccaagcccagcgacctgcacctgcag
atcggctacaaggtggagcgtcacatgtgcgacggggacatcgtcatcttcaaccgacag
cccaccctgcacaagatgtccatgatgggccacagggtcaggatcctgccctggtccacc
ttccgtttgaatctcagcgtcaccacgccctacaacgccgactttgacggcgacgagatg
aacctgcacctgccgcagtcgctggagacgcgggcggagatccaggagctggccatggtg
cccaggatgatcgtcaccccccagagcaaccggcccgtcatgggcatcgtgcaggacacg
ctgacggccgtgcgcaagttcaccaagagggacgtcttcctcgagaggggcgaggtgatg
aacctgctgatgttcctgtccacctgggacgggaaggtcccccaaccggccatcctcaag
ccgcggcccctgtggacggggaagcaaatcttctccctcatcatccccggccacatcaac
tgcatccgcacccacagcacccaccccgacgacgaggacagcggcccctacaagcacatc
tcccccggggacaccaaggtgatcgtggagaacggggagctcatcatgggcatcctgtgc
aagaagtccctggggacgtcggccggctccctggtgcacatctcctacctggagatgggc
cacgacaccacgcgcctcttctacagcaacatccagactgtcatcaacaactggctgctc
atcgagggtcacaccatcggcatcggcgactccatcgccgacgccaagacctaccaggac
atccagaacaccatcaagaaggccaagcaggacgtcatcgaggtgatcgagaaggcccac
aacaacgagctggagcccaccccgggcaacaccttgcggcagaccttcgagaaccaggtg
aaccggatcctcaacgacgcccgcgacaagacgggctcctcggcccagaagtccctctcc
gagtacaacaacttcaagtccatggtggtctcgggggccaagggctccaagatcaacatc
tcccaggtgatcgccgtggtgggccagcagaacgtggagggcaagcgcatccccttcggc
ttcaagcaccggacgctgccccacttcatcaaggacgactacggccccgagagccgcggc
ttcgtggagaactcctacctggccggcctcacgcccaccgagttcttcttccacgccatg
ggcggccgcgagggcctcatcgacaccgccgtcaagacggccgagacggggtacatccag
cggcgcctgatcaagtccatggagtcggtgatggtcaagtacgacgccacggtgaggaac
tccatcaaccaggtggtgcagctgcgctacggcgaggacgggctggccggcgagagcgtc
gagttccagaacctggccaccctcaaaccctccaacaaggccttcgagaagaagttcaag
ttcgactacaccaacgagcgggcgctgcggcggacgctgcaggaggagctggtcaaggac
atcctgtccaacgcccacatccagaacgagctggagcgcgagttcgaccgcatgcgcgag
gacagggaggtgctccgggtcatcttccccaccggggacagcaaggtggtgctcccctgt
aacctgctgcgcatgatctggaacgcgcagaagattttccatatcaactcgcggctgccc
tcggacctgcaccccgtcaaggtggtggagggggtgaaggagctgagccgcaagctggtg
atcgtgaacggggaggacccgctgagccggcaggcgcaggagaacgccacgctgctcttc
aacatccacctgcgctccacgctctgcagccgccgcatggtggaggagttccgcctcagc
ggggaggccttcgactggctgctgggcgagatcgagtccaagttcaaccaggccatcgcg
caccccggcgagatggtgggcgctctggccgcgcagtccctgggcgaaccggccactcag
atgaccctcaacaccttccactacgccggcgtgtcggccaagaacgtcaccctgggcgtg
ccgcgcctcaaggagctcatcaacatctccaagaaacccaaaacgccgtcgctgaccgtc
ttcctgctgggccagagcgcccgcgacgccgagcgcgccaaggacatcctgtgccgcctg
gagcacaccacgctgcgcaaggtgacggccaacacggccatctactacgaccccaacccg
cagagcacggtggtggccgaggaccaggagtgggtcaacgtctactacgagatgcccgac
ttcgacgtgagccgcatctcgccctggctgctgcgcgtcgagctcgaccgcaagcacatg
acggaccgcaagctcaccatggagcagatcgccgagaagatcaacgccggcttcggcgac
gacctcaactgcatcttcaacgacgacaacgccgagaagctggtgctgcgcatccgcatc
atgaacagcgacgagaacaagatgcaggaggaggaggaggtggtggacaagatggacgac
gacgtcttcctgcgctgcatcgagtccaacatgctgaccgacatgaccctgcagggcatc
gagcagatcagcaaggtgtacatgcacctgccgcagacggacaacaagaagaagatcatc
atcacggaggacggggagttcaaggcgctgcaggagtggatcctggagacggacggcgtc
agcctcatgagggtcctgagcgagaaggacgtggaccccgtgaggaccacgtccaacgac
atcgtggagatcttcaccgtgctggggatcgaggccgtgcggaaggcgctggagcgggag
ctctaccacgtcatctccttcgacggctcctacgtcaactaccggcacctggcgctgctg
tgcgacaccatgacctccaggggacacctgatggccatcacccggcacggcgtcaaccgc
caggacaccgggcccctcatgaagtgttccttcgaggagacggtggacgtcctgatggag
gcagctgcccacggcgagagcgaccccatgaagggcgtgtccgagaacatcatgctgggc
cagctggcgccggccggcaccggctgcttcgacctgctgctggacgccgagaaatgcaaa
cacggcatggagatccccagcgccctgcccgggctcggcgtcggcggccccaccgggatg
ttcttcggctcggcccccagccccatgggggggatgtccccggccatgaccccctggaac
cagggcgccaccccggcctacggcgcctggtcccccagcgtgggcagcgggatgaccccg
ggaggggccggcttctctcccagcgccgcctccgacgcctccggcttcagccccggttac
tccccggcctggtcgcccacgcccggctcgccggggtcacccggaccctccagcccctac
atcccttctcccggtggggccatgtcccccagctacagcccgacgtcccccgcctacgag
ccgcggtcaccgggcggctacaccccgcagagccccagctacagccccacttcccccagc
tacagccccacctcgcccagctacagccccacctcgcccaactacagccccacctcgccc
agctacagcccgacctcgcccagttacagccccacctcgcccagttacagccccacctcg
cccagctacagcccgacctcgccgagctacagccccacctcccccagctacagccccacc
tctcccagttacagcccgacctcgcccagctacagcccgacctctcccagttacagcccg
acctcgcccagttacagccccacctcgcccagctacagccccacctctcccagttacagc
cccacttcccccagttacagccccacctcgcccagttacagcccgacctccccgagctac
agccccacctctcccaactacagccccaccagccccaactacaccccgacctctcccagt
tacagccccacgtctcccagttacagccccaccagccccaactacaccccgacctcgccc
aactacagccccacctctcccagttacagccccacctcgcccagttacagccccacctcg
cccagttacagcccgtccagcccccgctacaccccgcagtcgcccacctacacccccagc
agccccagctacagccccagcagccccagctacagccccacgtcccccaagtacaccccg
accagccccagctacagccccagctcccccgagtacaccccgacgtcgcccaagtacagc
cccacctcgcccaagtacagccccacgtcccccaagtacagccccacctcgcccacctac
agccccaccacgcccaagtacagccccacctcgcccacctacagccccacctcgcccgtc
tacaccccgacctcgcccaagtacagccccacctcgcccacctacagccccacctcgccc
aagtacagccccacctcgcccacctacagccccacgtcacccaagggctccacctacagc
cccacgtcgcccggctacagccccacgtcgcccacctacagcctcaccagcccggccatc
agccccgacgacagcgacgacgacaactga
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integrated database retrieval system
