Citrobacter farmeri: CI104_02485
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Entry
CI104_02485 CDS
T05012
Name
(GenBank) ribonuclease E/G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
cfar
Citrobacter farmeri
Brite
KEGG Orthology (KO) [BR:
cfar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfar03019
]
CI104_02485
03009 Ribosome biogenesis [BR:
cfar03009
]
CI104_02485
Messenger RNA biogenesis [BR:
cfar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CI104_02485
Ribosome biogenesis [BR:
cfar03009
]
Prokaryotic type
rRNA processing factors
CI104_02485
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
DnaJ_CXXCXGXG
DUF8260
Motif
Other DBs
NCBI-ProteinID:
AST78025
UniProt:
A0ACA8D1D4
LinkDB
All DBs
Position
488251..489720
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AA seq
489 aa
AA seq
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MTAELLVNVTPSETRVAYIDGGILQEIHIEREARRGIVGNIYKGRVSRVLPGMQAAFVDI
GLDKAAFLHASDIMPHTECVAGEEQKQFTVRDISELVRQGQDLMVQVVKDPLGTKGARLT
TDITLPSRYLVFMPGASHVGVSQRIESEAERERLKKVVAEYCDEQGGFIIRTAAEGVCEE
DLASDAAYLKRVWTKVMERKKRPQTRYQMYGELALAQRVLRDFADAQLDRIRVDSRLTYE
ALLEFTAEYIPEMTSKLEHYSGRQPIFDLFDVENEIQRALERKVELKSGGYLIIDQTEAM
TTVDINTGAFVGHRNLDDTIFNTNIEATQAIARQLRLRNLGGIIIIDFIDMNNEDHRRRV
LHSLEQALSKDRVKTSINGFSQLGLVEMTRKRTRESVEHVLCNECPTCHGRGTVKTVETV
CYEIMREIVRVHHAYDSDRFLVYASPAVAETLKGEESHALAEVEIFVGKQVKVQIEPLYN
QEQFDVVMM
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgacggctgaattgttggtaaacgtaacgccatcggaaacacgcgtggcgtacattgat
ggcggtattctgcaggaaattcatattgagcgcgaagcgcgacgtgggatcgtaggcaat
atctacaaaggtcgggtcagtcgcgtacttccgggtatgcaggcggcttttgtagatatt
gggctggataaagctgcgtttcttcacgcttctgacattatgccccacactgaatgcgtg
gcgggtgaagagcagaaacagttcacggttcgcgatatttcagagctggtgcgtcagggg
caagacctgatggtgcaggtggtaaaagatccgctgggcaccaaaggcgcgcgcctgaca
accgacattaccttgccgtctcgctatctggtctttatgcctggtgcctcgcacgttggc
gtttctcaacgtatcgaaagcgaagccgagcgtgaacgcctgaaaaaagtggtcgccgaa
tactgcgacgagcagggcggatttatcatccgcaccgcggcggaaggggtctgtgaagag
gatctggcgtcagatgccgcgtaccttaagcgcgtctggaccaaagtgatggagcgcaaa
aagcgcccgcagacgcgttatcagatgtatggcgaactggcgctggcgcagcgtgtgctg
cgtgattttgccgatgcacagttagaccgcattcgcgtggattcccgtctgacctatgaa
gcgctgctggaatttactgcggaatatatcccggaaatgaccagcaagctggagcattac
agcggacgccagccgattttcgatctctttgacgttgaaaatgagatccaacgtgcgttg
gaacgcaaagttgaactgaaatccggcggctacctgattatcgatcagactgaagcgatg
accaccgtcgatatcaatactggcgcgtttgttggccatcgtaatctcgatgacactatc
tttaacacaaatattgaagcgacccaggcgattgcccgtcagttgcgactgcgtaatctt
ggcggcatcattattatcgattttatcgacatgaataatgaagatcaccgtcgccgggtg
ctgcattcgcttgagcaggcgctgagtaaagatcgggtgaaaaccagcattaatggtttt
tcccagttgggtctggtggaaatgacgcgtaagcgtacgcgagagagcgtggagcatgtg
ctgtgcaacgagtgtccgacctgtcatggccgcggcacggtgaagacagtggaaaccgtc
tgctatgagatcatgcgtgaaatcgttcgcgtgcaccacgcctacgactctgaccgcttt
ctggtctatgcttccccagcagtcgcggagaccctgaaaggggaagagtcgcacgcgctg
gcggaagtagagatttttgtcggcaaacaggtcaaagtacaaattgaaccgctctataac
caggagcagtttgacgtcgtcatgatgtaa
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