KEGG   Citrobacter farmeri: CI104_02695
Entry
CI104_02695       CDS       T05012                                 
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
cfar  Citrobacter farmeri
Pathway
cfar02020  Two-component system
cfar02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:cfar00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    CI104_02695
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    CI104_02695
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cfar03021]
    CI104_02695
Transcription machinery [BR:cfar03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CI104_02695
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID
Other DBs
NCBI-ProteinID: AST78063
UniProt: A0A8H9TUP2
LinkDB
Position
complement(532144..533577)
AA seq 477 aa
MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALESNPLLEQTDLHDEVDTHE
TQDSESLDTADALEQKEMPEELPLDASWDEIYTAGTPSGTSGDYIDDELPVYQGETTQTL
QDYLMWQVELTPFSDTDRAIATSIVDAVDDTGYLTVSLDDILESMGNEDVGLDEVEAVLK
RIQRFDPVGVAAKDLRDCLLIQLSQFDKATPFLEEARQIISDHLDLLANHDFRTLMRVTR
LKEEVLKEAVNLIQSLDPRPGQSIQTGEPEYVIPDVLVRKHNGHWTVELNGDSVPRLQIN
QHYAAMCNGGRNDADSQYIRSNLQDAKWLIKSLESRNDTLLRVSRCIVEQQQAFFEQGEE
FMKPMVLADIAQAVEMHESTISRVTTQKYLHSPRGIFELKYFFSSHVNTEGGGEASSTAI
RALVKKLIAAENPAKPLSDSKLTSMLSEQGIMVARRTVAKYRESLSIPPSNQRKQLV
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgaagcaaggtttgcaactcaggctgagccaacaactggcgatgacgccgcaactacaa
caggcgatccgtctgttgcagttgtccacgctggaactgcagcaggaactccagcaggcg
ctggaaagtaatccgctgctggagcaaaccgatcttcacgacgaagttgatacccacgaa
acgcaggacagtgaatcgctggataccgccgacgccctcgaacaaaaagagatgccggaa
gagttaccgctcgacgccagctgggatgaaatctacaccgccgggacgccgtcgggcacc
agcggtgattacatcgacgatgagctgcctgtttatcagggtgaaaccacgcagacccta
caggattacctgatgtggcaggtggaactcacccctttttctgataccgaccgcgcgatc
gctacctctattgttgatgccgttgatgataccggctatctcaccgtttcgctggatgac
atcctcgaaagcatgggcaatgaagacgtggggcttgatgaggtcgaagccgttctcaaa
cgtattcagcggtttgatcccgttggtgtggcggcaaaagatctgcgtgattgtctgcta
atccagctctcgcagttcgacaaagcgacgcctttccttgaagaagcccggcagatcatc
agcgatcatctcgatctgctggcgaaccacgacttccgcaccctgatgcgcgtcactcgc
ctcaaagaagaggtgctcaaagaggcggtcaatctgattcagtcgctcgatcctcgcccc
ggccagtcgatccagaccggtgaaccagaatacgtgatcccggatgtgctggtacgtaag
cataacgggcactggacggtcgagctcaacggcgacagcgttccacgcctgcagatcaat
caacactatgccgcaatgtgcaacggtgggcgcaatgacgccgacagccagtacatccgc
agtaatttgcaggacgcgaaatggctgattaagagtctggagagccgcaacgataccctg
ctgcgcgtcagccgttgtatcgttgagcagcaacaagccttctttgagcaaggcgaagag
tttatgaaaccgatggtactggcggatatcgcccaggccgtcgagatgcatgagtcgacc
atttctcgtgtgaccacgcagaagtatctgcacagtccgcgcggcatttttgaactgaag
tattttttctccagccatgtgaataccgaggggggtggcgaagcttcctccacggcgatc
cgcgcactggtgaagaagttgattgcggcggaaaaccccgcgaagcccctgagcgacagc
aagctaacatcgatgctgtcggaacaaggcatcatggtggcacgccgcaccgttgcgaag
taccgagagtctttatccattccgccgtcaaaccagcgcaaacaactggtgtga

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