Citrobacter farmeri: CI104_02695
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Entry
CI104_02695 CDS
T05012
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
cfar
Citrobacter farmeri
Pathway
cfar02020
Two-component system
cfar02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cfar00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CI104_02695
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CI104_02695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cfar03021
]
CI104_02695
Transcription machinery [BR:
cfar03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CI104_02695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
AST78063
UniProt:
A0A8H9TUP2
LinkDB
All DBs
Position
complement(532144..533577)
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AA seq
477 aa
AA seq
DB search
MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALESNPLLEQTDLHDEVDTHE
TQDSESLDTADALEQKEMPEELPLDASWDEIYTAGTPSGTSGDYIDDELPVYQGETTQTL
QDYLMWQVELTPFSDTDRAIATSIVDAVDDTGYLTVSLDDILESMGNEDVGLDEVEAVLK
RIQRFDPVGVAAKDLRDCLLIQLSQFDKATPFLEEARQIISDHLDLLANHDFRTLMRVTR
LKEEVLKEAVNLIQSLDPRPGQSIQTGEPEYVIPDVLVRKHNGHWTVELNGDSVPRLQIN
QHYAAMCNGGRNDADSQYIRSNLQDAKWLIKSLESRNDTLLRVSRCIVEQQQAFFEQGEE
FMKPMVLADIAQAVEMHESTISRVTTQKYLHSPRGIFELKYFFSSHVNTEGGGEASSTAI
RALVKKLIAAENPAKPLSDSKLTSMLSEQGIMVARRTVAKYRESLSIPPSNQRKQLV
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaggtttgcaactcaggctgagccaacaactggcgatgacgccgcaactacaa
caggcgatccgtctgttgcagttgtccacgctggaactgcagcaggaactccagcaggcg
ctggaaagtaatccgctgctggagcaaaccgatcttcacgacgaagttgatacccacgaa
acgcaggacagtgaatcgctggataccgccgacgccctcgaacaaaaagagatgccggaa
gagttaccgctcgacgccagctgggatgaaatctacaccgccgggacgccgtcgggcacc
agcggtgattacatcgacgatgagctgcctgtttatcagggtgaaaccacgcagacccta
caggattacctgatgtggcaggtggaactcacccctttttctgataccgaccgcgcgatc
gctacctctattgttgatgccgttgatgataccggctatctcaccgtttcgctggatgac
atcctcgaaagcatgggcaatgaagacgtggggcttgatgaggtcgaagccgttctcaaa
cgtattcagcggtttgatcccgttggtgtggcggcaaaagatctgcgtgattgtctgcta
atccagctctcgcagttcgacaaagcgacgcctttccttgaagaagcccggcagatcatc
agcgatcatctcgatctgctggcgaaccacgacttccgcaccctgatgcgcgtcactcgc
ctcaaagaagaggtgctcaaagaggcggtcaatctgattcagtcgctcgatcctcgcccc
ggccagtcgatccagaccggtgaaccagaatacgtgatcccggatgtgctggtacgtaag
cataacgggcactggacggtcgagctcaacggcgacagcgttccacgcctgcagatcaat
caacactatgccgcaatgtgcaacggtgggcgcaatgacgccgacagccagtacatccgc
agtaatttgcaggacgcgaaatggctgattaagagtctggagagccgcaacgataccctg
ctgcgcgtcagccgttgtatcgttgagcagcaacaagccttctttgagcaaggcgaagag
tttatgaaaccgatggtactggcggatatcgcccaggccgtcgagatgcatgagtcgacc
atttctcgtgtgaccacgcagaagtatctgcacagtccgcgcggcatttttgaactgaag
tattttttctccagccatgtgaataccgaggggggtggcgaagcttcctccacggcgatc
cgcgcactggtgaagaagttgattgcggcggaaaaccccgcgaagcccctgagcgacagc
aagctaacatcgatgctgtcggaacaaggcatcatggtggcacgccgcaccgttgcgaag
taccgagagtctttatccattccgccgtcaaaccagcgcaaacaactggtgtga
DBGET
integrated database retrieval system