Citrobacter farmeri: CI104_02905
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Entry
CI104_02905 CDS
T05012
Name
(GenBank) tRNA pseudouridine(55) synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cfar
Citrobacter farmeri
Brite
KEGG Orthology (KO) [BR:
cfar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cfar03016
]
CI104_02905
Enzymes [BR:
cfar01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CI104_02905
Transfer RNA biogenesis [BR:
cfar03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CI104_02905
Prokaryotic type
CI104_02905
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AST78103
UniProt:
A0A8H9NT43
LinkDB
All DBs
Position
570217..571161
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDIHGVLLLDKPQGMSSNDVLQKVKRIYNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIARLGQRTDTSDADGQIVQERPVTFTPEQLAAALDTFRGDIE
QVPSMYSALKYQGKKLYEYARQGIDVPREARPITVYELLFIRHEGDELELEVHCSKGTYI
RTIIDDLGEKLGCGAHVIFLRRLTVSKYPVDRMVTLEHLRELVEQAEQQGIPAAQLLDPL
LMPMDSPASDYPIVNLPLTSSVYFKNGNPVRTNGAPLEGLVRVTEGDDGKFIGMGEIDDE
GRVAPRRLVVEYPA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgtcgtggtcgcgacattcacggtgtcctgctgctggataagccg
cagggcatgtccagcaatgacgtactgcaaaaagtgaaacgcatctataacgccaaccgc
gccgggcataccggggcgctggatccgttagcgacgggtatgctgccgatctgcctcggg
gaagcgaccaagttttcgcagtatctgttggattccgataagcgttatcgggtgattgcc
cgtctggggcagcgtacagacacctccgatgccgatgggcaaatcgtgcaggagcgcccg
gtcaccttcacccctgaacagttggctgccgcgctggatactttccgcggcgatattgag
caggtgccgtcgatgtattcggcgctaaagtatcagggtaaaaaactgtacgaatacgcg
cgtcagggcattgacgtgccgcgcgaagcccgaccaattaccgtttacgagctgctgttc
atccgccatgaaggagatgagctggagctggaagttcactgctcgaaaggcacttatatt
cgcaccattattgacgatttaggtgagaagctgggatgtggcgcccatgtgatcttcctt
cgtcgtctgacggttagcaaatatccggtggatcgtatggtcacgctggaacatctgcgt
gaattggtcgaacaggcggaacaacaggggataccagcagcacagttgcttgatccgctg
ctgatgccaatggacagtccggcttcggactatcccattgttaatttgccgttaacctct
tcagtttacttcaaaaacggtaacccagttcgcacgaacggcgcaccgctggagggactg
gttcgtgttacggaaggtgatgatggtaaatttatcggtatgggcgagatcgacgacgaa
ggtcgcgtagcgcctcgccgattagtggtggagtatccggcgtag
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