Citrobacter farmeri: CI104_03645
Help
Entry
CI104_03645 CDS
T05012
Name
(GenBank) mismatch-specific DNA-glycosylase
KO
K03649
double-stranded uracil-DNA glycosylase [EC:
3.2.2.28
]
Organism
cfar
Citrobacter farmeri
Pathway
cfar03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cfar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CI104_03645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfar03400
]
CI104_03645
Enzymes [BR:
cfar01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.28 double-stranded uracil-DNA glycosylase
CI104_03645
DNA repair and recombination proteins [BR:
cfar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CI104_03645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AST78239
UniProt:
A0A8H9NTV3
LinkDB
All DBs
Position
703927..704433
Genome browser
AA seq
168 aa
AA seq
DB search
MINDILAPGLRVVFCGINPGKSSAHTGFHFAHPGNRFWKIIHQAGFTDRLLKPEEEQHLL
DTRCGITMLVERPTVQATEVNLHELRSGGRELIKKIDDYQPAALAILGKQAYEQAFSQRG
TKWGKQSIMIGVTQVWVLPNPSGLNRATLDKLVEAYRELDEALIVRGL
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacgatattttggcccctggtctgcgggtggtgttttgcggaattaatccgggg
aagtcctcggcacacaccggttttcactttgcccatccgggaaatcgcttctggaagatt
atccatcaggcggggtttactgacaggttgctgaagcccgaagaagagcaacaccttctg
gatacgcgctgcgggatcactatgttggtcgagcgtccgacggtgcaggcaacggaggta
aatctgcatgaactgcgtagcggcgggcgggagttgatcaagaaaatagacgattatcag
ccggctgctctggcaatccttggtaagcaggcctacgagcaggcgttcagtcagcgtgga
acgaagtggggcaagcagagcatcatgattggcgttacgcaggtgtgggtgttgccgaat
ccgagtggattgaacagagcgacgctggacaagctggttgaagcgtatcgtgaactcgat
gaggcgctgatcgtccgcggattgtaa
DBGET
integrated database retrieval system
