Citrobacter farmeri: CI104_05885
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Entry
CI104_05885 CDS
T05012
Name
(GenBank) propionate catabolism operon regulatory protein PrpR
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
cfar
Citrobacter farmeri
Brite
KEGG Orthology (KO) [BR:
cfar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cfar03000
]
CI104_05885
Transcription factors [BR:
cfar03000
]
Prokaryotic type
Helix-turn-helix
Other families
CI104_05885
BRITE hierarchy
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GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
Mg_chelatase
AAA_5
AAA
AAA_2
AAA_16
HTH_psq
HTH_23
DUF6262
Motif
Other DBs
NCBI-ProteinID:
AST78642
UniProt:
A0A8H9NTX4
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Position
complement(1186470..1188065)
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AA seq
531 aa
AA seq
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MATTNLPPRVNDDKPVIWTVSVTRLFDLFRDISLEFDHLATITPIQLGFEKAVTYIRKKL
ATERCDAIIAAGSNGAYLKSRLSIPVILIKPSGFDVLQALAKAGKLTASIGVVTYQETLP
ALMAFQKTFSLQLEQRSYITEEDARGQISELKANGVEAVVGAGLITDLAEEAGMTGIFIY
SAATVRQAFSDALDMTRHTQRRPGHYASDQALRTRYELGDIRGESAQMEQVRHTIMLYAR
SPASVLIQGETGTGKELAAQAIHREFCTRAGTRGDKSTHPFVAVNCGAITESLLEAELFG
YEEGAFTGSRRGGRAGLFEIAHGGTLFLDEIGEMPLPLQTRLLRVLEEKEVTRVGGHHPI
PVTVRVISATHCNLEEEMKRGLFRRDLFYRLSILRLSLPALRERPADILSLAEGFLKQSL
SALSVPFTESVRAGLTQSACVLLQYHWPGNIRELRNLMERLALFLSVEPMPLLDEHLLQR
LLPELAEIETPSFPASSATPQQVLAQFNGDKRAAARYLGISRTTFWRRLKE
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgacaaatcttcccccacgggtgaatgatgacaaaccggttatctggacggtc
tcggtgacgcgactgttcgatctgtttcgcgacatcagccttgagttcgatcatctggcg
accatcaccccaatccagctcggttttgaaaaggcggtcacctatattcgcaaaaagctg
gcgaccgaacgctgtgatgcgatcatcgccgccggatccaacggcgcatatctgaaaagc
cgtttgtcgattccggtgatcctgatcaaacccagcggttttgacgtcctgcaggcgctg
gcaaaggccggaaaactaaccgcttccattggcgtggtgacctaccaggagacactgccg
gcgctaatggcctttcagaaaacctttagtctgcaactggaacagcgcagctatatcacc
gaagaagatgcgcgtgggcagatcagcgaactgaaagctaacggcgttgaggcggtggtc
ggcgcggggctgatcaccgatctggcggaagaggccggcatgaccggtatctttatctat
tccgccgccacggtacgccaggccttcagcgatgcgctggacatgactcgccacacccag
cgccgtcccggtcattatgcctccgatcaggcgctgcgtacccgctatgaactgggagat
attcgcggcgagtccgcgcagatggaacaagtgcgccataccattatgctgtatgcccgc
tcgccagcctctgtcctgattcagggggaaaccggcaccgggaaggagctggcggcccag
gccattcaccgggagttttgtacgcgtgcaggcacgcgtggagacaagtcgacccatccg
ttcgtcgcagtcaactgtggcgcgattactgaatcattacttgaagcggagttgttcggc
tatgaggagggggccttcaccgggtcacgacgcggtgggcgtgccgggctgtttgaaatc
gcccacggagggacgctatttctcgatgagatcggtgaaatgccgctgccgctgcaaacc
cgactactgcgcgtactggaagaaaaagaggtcactcgggtaggtggacatcaccccatt
ccggtgacggtgcgggtgatcagcgccacccactgtaatctggaagaggagatgaaacgg
ggactgtttcgtcgcgatctgttttatcgtctgagtattttacgtctgtcgctgccggct
ctgcgtgaacgccccgcggatatcctgtcgctggcggaaggctttttaaaacaatcgctg
tccgcgctcagtgtaccctttaccgagtcggtgcgcgccggactgacgcagagcgcttgc
gttctgttgcaatatcactggccggggaatattcgcgagttgcgcaatttgatggaacgg
ctggcgctgtttttaagcgttgagcctatgccactgctggatgagcacttattacagcgg
ttactgccggaactggcggagatcgaaacgccctcattcccggcatcttcagccacgccg
cagcaggtactggcgcagtttaatggggataaacgtgccgcagcccgctacctggggatc
agcagaaccacattctggcgacgcctgaaggaatga
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