Citrobacter farmeri: CI104_05935
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Entry
CI104_05935 CDS
T05012
Name
(GenBank) hypothetical protein
Organism
cfar
Citrobacter farmeri
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
AC_1
PATR
Pertactin
Motif
Other DBs
NCBI-ProteinID:
AST78651
LinkDB
All DBs
Position
1200382..1204173
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AA seq
1263 aa
AA seq
DB search
MQHFRRNQIALLIASIFISSGPATSATIHVDGSFPYAAQSNTGTHGVNGGSEGAGAGYVL
SPNPETTAADNSVSVGSGTTITGGNGYAGGDGGDGMSGNSVTISNSGKIIGGEGSYSVSG
SGTGGVGISGTDLSITNSRTGSITGGEGDRRSASGAGISGNRLMITNDGAITGGDGSYGY
DDYSGTSGIGGAGISGTDLTIINTYRITGGDGDSSGKGGDAISGSALTITNSGAILGGGG
GYGYDGVEGGNAGAGITGRNMVIDNLARGSITGGRGNSRRLGGDAISGSALTITNGGSIV
GGEGGFGYGEDAGNAGAGISGSDMTIHNLAGASVIGGEGGYGGLDDAGGAGMPTAGGTGI
LGDNMTITNGGSITGGEGGFAGGDTTSPDGADGGAAISGRNLTISNLAGGTITGGEGNYS
GSRENTNTSDGGNGGIGIFGDSLRINNSGSVVGGRGSYGSNGGANGAGGAAISGSNLAII
NNSAITGGAPYRSGGEAGAALSLTGGSNLLTLNTGSTITGDVRLADGASDSATTLQIVNN
DAANRAINGNLTVGQAASVTLTERPIEFSGNASFAEGASLTLGEGVSLKAASLSVGDNAS
LNASITRWDMHDILLVETTNGITGAFSYSNALVAGMNQPDFAYINAGSRIIQYSLYWNGL
DADAHGTFTLDEGRTFDLGVALADNTAHVNPAWDGKSLTKAGDGTLILSAENTYTGSTYV
SEGMLKTTTPNAFANTSGVTVGEEGTLNLNGNSQIVNALDNRGTLLIDDYGVPPSSPLSV
MLTGNVTNSGNIILNNSATSAGNTLTIDGDYAGNGGSLSLGTVLGGDSSLTDKLVITGNA
TGTTYVQVSNENGSGALLHEGIKIIETGSSTAEAFVQRGRIVAGSYEYHVKQGTASGSDS
NNWYLTSLTDSPDPDDSSDVVDNDRPAPGDSSDAVNIYRPEGGSYASNLAAANTLFNTRL
QDRQGGSWYTDPVTGERHMTSMWLRTSGGRNKSRMPDDQNTASSNRVVVQVGGSLIQGSA
NGTDSYQLGAMAGYGKQDNDIHNRLSGYGSRGEVSGYSAGLYGTWYQNAVDKTGLYVDSW
VLYNWFDNTVKGDEIAQESYKSKGLTASLESGYAFHMGSFTTAGDMEGNVYLRPQAQATW
MGVKANDHTEKNGTRVQGQGDNNIQTRLGMRLYVNGKNATEKGTVREFEPFIEANWIHNT
KQYGVRMNDTSTSLQGSRNVGEVKVGVEGRLTRDLSVWGNVAQQMGNNGFHDTSGVLGIK
YQF
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atgcaacattttcgcagaaaccagatagcgttattgatcgcatcgatcttcatatcctcc
ggaccggcaacaagcgccacgattcatgtcgatggttcatttccttatgcggcgcaatcc
aacactgggactcacggggttaatggcggcagtgaaggtgccggagccgggtatgtctta
tcgccgaacccggaaactaccgcggcggataacagcgtaagcgtcggtagtggcaccacg
ataaccggcggtaatggctacgcgggcggcgatggcggcgacggaatgtccggtaatagt
gtaaccatcagcaacagcggaaagattattggtggagagggtagctatagcgttagtggc
agtggcacaggtggtgtgggaatatcgggtacggacctgtcgataaccaattctcgtacc
ggctccatcaccggtggcgaaggggatagacgttccgctagcggtgcgggtatctctggt
aaccgtctcatgataaccaacgatggtgcgattaccggaggcgatggcagttacggctat
gatgactacagcgggacgagcggtattggcggcgctggcatatcaggtaccgatctgacg
atcattaatacttaccgtattaccggtggtgacggtgattccagtggcaagggaggcgat
gccatatcgggttccgcgctgaccatcaccaacagcggcgctattctcggcggcggaggg
ggatatggttatgatggggttgaaggtggcaatgccggtgccggaattaccggcagaaat
atggtcatcgacaatcttgcccgtggatcaattacgggtggtcgaggcaattccagacga
ttagggggcgatgctatatcaggttccgctctgaccataaccaatggcggatccatcgtc
ggtggcgaagggggatttggctatggagaagatgccggcaatgcgggtgctggaatatcc
ggtagcgatatgaccattcataatttagcgggtgcttcagtgatcggcggtgaaggcggc
tatggcggcctggacgatgcaggtggcgccggaatgcctaccgcaggcggcacgggaata
cttggcgataatatgaccatcaccaacggcggctccattaccggtggtgaaggggggttt
gccggcggcgatacgacaagccctgacggcgcagacggcggtgcggctatatccggtcgc
aatctgaccatcagtaatctggctggtggcaccatcactggcggagaaggcaattacagc
ggcagcagagagaatactaacaccagtgacggcggcaacggcggcatcggaatattcggt
gacagtctgaggattaacaacagcggttctgtcgtcgggggcagaggcagttacggcagc
aacggcggcgctaacggtgcaggtggcgcagcgatatccggcagcaatctggcgataatc
aataacagcgctatcaccggaggtgcaccctacaggagcggtggcgaagcgggggcggct
ctcagtcttaccggcggcagcaatctgctgacgctgaataccggctcaactatcaccggc
gatgtcaggcttgcagacggtgcgagcgacagcgcgacaacgttgcagatcgtcaacaat
gacgcggcaaacagagccatcaacggtaatctgaccgtgggtcaggcagccagcgtgacg
ctgacggaacgccccattgaattttccggtaacgcgtcgtttgccgaaggggcgtcgctc
acccttggcgaaggcgtcagcctcaaggcggcgtctctctcggttggtgataacgcatcg
cttaatgccagtatcactcgctgggatatgcacgacattctgctggttgaaaccaccaac
ggtattacgggcgcgttttcttacagtaatgccctcgtcgcgggcatgaaccagccggac
tttgcctatatcaacgcaggctcccggattattcaatactccctgtactggaacggtctg
gacgccgacgcgcacgggacgttcacgctggatgagggcagaaccttcgatcttggcgtc
gctctggctgacaatacggcgcacgtcaacccggcctgggacggtaaaagtctgaccaaa
gcgggagacggtacgctgatactgtcagcggaaaatacttataccgggtcgacctatgtc
agcgaaggcatgctgaagacgacgacgccgaatgcattcgccaatacctctggcgtaacc
gtcggcgaggaagggacgcttaaccttaacggcaacagccagatcgtcaacgcgttggat
aaccgtggaaccctgctgattgatgattatggtgtgccaccgtcttctcctctcagcgtc
atgctgactggcaatgtcacgaacagcggcaatattattctcaacaacagcgcaaccagc
gccgggaatacgctgactatcgatggcgactatgcgggtaacggcggcagcctttcgctg
ggcaccgttctaggcggcgacagcagcctgacggacaaactggtgattaccggcaacgca
accggcacaacctacgtgcaggttagcaacgagaatggttcaggggccttgctgcatgaa
gggattaaaatcattgaaaccggtagttctacggctgaggcctttgttcaacgtggtcgc
atcgtggcgggcagttatgaatatcacgtgaagcagggaacggcttccggtagtgacagt
aataactggtatttaaccagtctgacggacagcccagatcctgacgattcctctgatgtt
gtcgataacgatcgaccagcaccaggcgattcctctgacgcggtcaatatctatcgccct
gagggagggagctacgccagcaacctggcggcagcgaatacgctgtttaacacccgattg
caggaccgtcagggaggatcctggtataccgaccctgtcacaggggaacgtcacatgacc
agcatgtggctgcgtacctcgggcgggcgcaataagagccggatgcctgacgatcagaac
accgcttcatctaaccgcgttgtcgtgcaggtcggcggctcgctgatccagggcagcgcg
aacggtacggatagctatcagttgggcgcaatggcgggctatggtaagcaggataacgac
atccataacagattgtcaggctacggttctcgtggcgaggtgagcggctacagcgccggt
ttgtacggaacctggtatcagaacgccgtcgataaaaccggcctgtatgttgattcctgg
gtgctttataactggtttgacaatacggttaaaggtgatgagattgctcaggagagctac
aaaagcaaggggctgacggcgtcgctggagtcgggatacgctttccatatggggtcattc
accacggctggcgacatggaaggtaacgtctatcttcgcccacaggcacaggccacctgg
atgggggtgaaggctaacgaccatacggagaaaaacggcacgcgggttcagggccagggt
gacaataatattcagacccgtctgggtatgcgcctttacgtcaatggcaaaaacgccacg
gaaaaaggaaccgtacgcgagtttgaaccctttatcgaggcgaactggatacacaacacg
aagcagtacggcgtcagaatgaatgacacgagtacctccctgcaaggaagtcgaaacgtc
ggtgaggtgaaagtgggcgtcgaggggcggttgacccgggatctgagcgtttggggcaac
gtggcgcaacaaatggggaataacggctttcacgacacgagcggcgtattggggataaaa
taccagttctag
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