Citrobacter farmeri: CI104_06305
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Entry
CI104_06305 CDS
T05012
Name
(GenBank) (2E,6E)-farnesyl diphosphate synthase
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
cfar
Citrobacter farmeri
Pathway
cfar00900
Terpenoid backbone biosynthesis
cfar01100
Metabolic pathways
cfar01110
Biosynthesis of secondary metabolites
Module
cfar_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
cfar00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
CI104_06305
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cfar01006
]
CI104_06305
Enzymes [BR:
cfar01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
CI104_06305
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
CI104_06305
Prenyltransferases [BR:
cfar01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
CI104_06305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Arm-DNA-bind_3
UbiA
Motif
Other DBs
NCBI-ProteinID:
AST78722
UniProt:
A0A8H9NTX3
LinkDB
All DBs
Position
complement(1283754..1284653)
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AA seq
299 aa
AA seq
DB search
MDFSQQLQACVEQANQALSRFIAPLPFQNTPVVETMQYGALLGGKRLRPFLVYATGQMFG
VSLSTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCHIKFGEANAILAGDALQTL
AFSIISDAPMPEVADRDRIAMISELASASGIAGMCGGQALDLDAEGKQVPLEALEKIHRH
KTGALIRAAVRLGALTAGENGRNALPILDKYAESIGLAFQVQDDILDVVGDTATLGKRQG
ADQQLGKSTYPALLGLEQARNKARDLIAEARQSLNQLAAQSLDTSALEALADYIIQRNK
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggatttttcgcagcagcttcaggcctgcgttgaacaggccaaccaggcgctgagccgt
tttattgccccactgccctttcagaacactcccgtggtcgaaaccatgcagtatggcgca
ttattaggcggtaaacgtctgcgtccatttctggtttatgcaaccggtcagatgtttggt
gtcagcctgagcacgctggatgccccggcggcggccgttgaatgcattcatgcgtattcg
ctgatccatgacgatctgcccgcaatggacgatgacgatctgcgtcgtggtctgccgacc
tgtcacatcaagtttggcgaggccaatgccattctggcaggcgatgccctgcaaacgctg
gcgttctcgattatcagcgacgccccgatgccggaagttgccgaccgcgatcggatcgcg
atgatttccgaactggcgagcgccagcggaatcgccggaatgtgcggcggtcaggcactg
gatctcgacgccgaagggaaacaggtgccgcttgaggcgctggagaaaatccatcgtcat
aagaccggcgcactgattcgcgccgcggttcgcctgggggcgttaactgccggagaaaac
ggcagaaatgccctgccgatactcgacaaatacgcagaaagtatcggtctggcattccag
gttcaggatgacattctggatgtggtgggcgatactgcaacgttgggtaaacgtcagggc
gcagaccagcagcttggcaaaagtacctatcctgcacttctgggccttgagcaagcccgg
aataaagcccgggatttaatcgcagaggctcgccagtcgctaaaccaactggccgcacag
tcactcgatacctcggcactggaagcgctagcggactacataatccagcgtaataaataa
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