Citrobacter farmeri: CI104_07520
Help
Entry
CI104_07520 CDS
T05012
Name
(GenBank) endolytic peptidoglycan transglycosylase RlpA
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
cfar
Citrobacter farmeri
Brite
KEGG Orthology (KO) [BR:
cfar00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cfar01011
]
CI104_07520
Enzymes [BR:
cfar01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
CI104_07520
Peptidoglycan biosynthesis and degradation proteins [BR:
cfar01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
CI104_07520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
Motif
Other DBs
NCBI-ProteinID:
AST78949
UniProt:
A0A8H9NW91
LinkDB
All DBs
Position
complement(1535976..1537085)
Genome browser
AA seq
369 aa
AA seq
DB search
MRKQLPGVCVAAGIMLLAACTSDDGQQQNTVAPQPAVCNGPVVEISGADPRFEPLNPTAN
QDYQRDGKSYKIVQDVSRFSQAGFAAIYDAEPGSNLTASGEAFDPMQLTAAHPTLPIPSY
ARITNLANGRMIVVRINDRGPYGNDRVISLSRAAADRLNTSNNTKVRIDPIIVAQDGSLS
GPGMACTTVAKQTYALPSRPDLSGGMGSASSAPEAMQPQGDVRAISNSTLQSEDNAGAPV
QSSGFLGAPTTLAAGVLEGSEPTPAPQPAAATPASAPVSAPAAPPTATPAAASASGSYVV
QVGAVSDQGRAQQYQQRLGQQFGVPGRVTQNGAVWRIQLGPFASKAQASALQQRLQSEAQ
LQSFITGAQ
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaagcaattgcctggagtctgcgtcgcagcaggaattatgctgctcgcggcatgt
acgagtgatgatggtcagcaacagaataccgtcgcgccgcagccagcggtatgtaatgga
cccgtcgttgaaatcagcggggccgatccgcgttttgaaccgctcaacccgaccgctaat
caggattaccagcgagacggtaagagctacaagattgtgcaggatgtctcgcgctttagt
caggcaggattcgcagcgatctatgatgccgaacccggcagtaacctgaccgcttcaggt
gaagcgttcgatccgatgcagctcaccgcagcgcatccgacgttaccgatcccaagctat
gcgcgaattaccaacctcgccaatggacggatgatcgtggtacgcattaacgatcgtggc
ccctatggtaacgatcgcgtgatttcgctgtcacgtgctgctgccgaccgtctgaacacc
tccaataacaccaaagtgcgtatcgatccgattattgtcgcgcaggatggttcactgtcc
gggccaggtatggcctgtaccacggtagctaaacagacttatgccctgccctcacgtccg
gatctgagcggtggtatgggcagtgcctcctctgcaccggaagccatgcagccacagggt
gacgttcgcgccatcagtaattccacgctgcaaagtgaagacaacgccggcgcacccgtt
cagagtagcggcttcctcggcgcaccaacgaccctggccgcaggcgtactggaaggcagt
gaaccgacgccagcgccacagcccgcagctgcaacgcccgctagcgcgccagtcagtgcg
ccggcagctccccctaccgccacgcctgccgccgcttccgccagcggcagttacgtcgtc
caggtgggtgcggtgagcgatcaggggcgcgcccagcagtatcaacagcgcttaggccag
cagtttggcgtgccgggacgcgtcacgcagaacggcgccgtgtggcgtattcagctcggg
ccgttcgccagcaaagcgcaagccagtgcgttacagcagcgcttacaatctgaagcccaa
ttacagtccttcattaccggcgcgcagtaa
DBGET
integrated database retrieval system
