Citrobacter farmeri: CI104_07625
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Entry
CI104_07625 CDS
T05012
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
cfar
Citrobacter farmeri
Brite
KEGG Orthology (KO) [BR:
cfar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cfar03016
]
CI104_07625
Enzymes [BR:
cfar01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
CI104_07625
Transfer RNA biogenesis [BR:
cfar03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
CI104_07625
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
AST78968
UniProt:
A0A8H9TW10
LinkDB
All DBs
Position
complement(1557576..1559000)
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AA seq
474 aa
AA seq
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MTKKLHIKTWGCQMNEYDSSKMADLLDATHGYQLTDVAEEADVLLLNTCSIREKAQEKVF
HQLGRWKLLKEKNPDLIIGVGGCVASQEGDHIRQRAHYVDIIFGPQTLHRLPEMINSVRG
NRSPVVDISFPEIEKFDRLPEPRAEGPTAFVSIMEGCNKYCTYCVVPYTRGEEVSRPSDD
ILFEIAQLAAQGVREVNLLGQNVNAWRGQNYDGTTGSFADLLRLVAAIDGIDRIRFTTSH
PIEFTDDIIEVYRDTPELVSFLHLPVQSGSDRVLNLMGRTHTALEYKAIIRKLRAARPDI
QISSDFIVGFPGETTQDFEQTMKLIADVNFDMSYSFIFSARPGTPAADMVDDVPEEEKKQ
RLYILQDRINQQAMAWSRRMLGTVQRILVEGTSRKSIMELSGRTENNRVVNFEGSPEMIG
KFVDVEITDVWTNSLRGKVVRTEEEMGLRIAETPESVIARTRKENEIGVGFWQP
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaaaaactccatattaaaacctggggctgtcagatgaacgaatacgattcatcg
aagatggccgatctgctggatgccactcacgggtatcaactgaccgacgtggcggaagaa
gcggatgtgctgctgctgaatacctgctcaatccgcgagaaggctcaggaaaaagtcttc
catcagttggggcgctggaaactcttaaaagagaagaatcccgacctgattatcggcgtc
ggcggctgtgtggcgtctcaggaaggtgatcacattcgccagcgcgcgcattatgtcgat
atcatttttgggccgcaaacgttgcatcgcctgcctgaaatgattaactccgttcgcggc
aaccgcagtccagttgtcgacatcagtttcccggagatcgagaagtttgaccgtctgccg
gaaccgcgcgcggaaggtccgaccgcctttgtctcaattatggaaggctgcaacaagtac
tgtacttactgcgtggtgccttacactcgcggtgaggaagtcagccgcccgtctgatgac
atcctgtttgagatcgcccagcttgccgctcagggcgtgcgtgaagtcaatctgctcggt
cagaacgtcaacgcctggcgcggacaaaactatgatggtaccaccggttcgttcgccgac
ctgctgcgtctggttgccgccattgatggcattgatcgtattcgcttcaccaccagccat
ccgatcgagttcaccgacgacatcattgaggtctatcgcgacacgccggagctggtgagc
ttcctgcacctgccggtacagagcggttcggatcgcgtactgaacctgatggggcgtacc
cacacggcgctggaatacaaagcgatcatccgtaagctgcgtgcggcgcgtccagacatt
cagataagctctgactttatcgtcggtttcccgggtgaaaccacccaggacttcgagcag
accatgaagttgattgccgacgtcaatttcgacatgagctacagctttatcttctctgca
cgtccgggaacgccggccgccgacatggtggatgacgtgccggaagaagagaagaagcag
cgtctgtatattttgcaggatcgcattaaccagcaggcgatggcctggagccgtcgtatg
ctcggcaccgttcagcgcattctggtggaaggaacgtcgcgcaagagcatcatggagctg
tctggtcgtactgaaaataaccgcgtggtgaacttcgaaggctcgccggaaatgatcggt
aaatttgtcgatgtggaaatcaccgatgtctggaccaactcactgcgcgggaaagtggtg
cgcaccgaagaggaaatggggctgcgcattgccgaaaccccggaatcggtgattgcccgt
acccgtaaagagaacgagattggcgtcggattctggcagccttaa
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