Citrobacter farmeri: CI104_07825
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Entry
CI104_07825 CDS
T05012
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
cfar
Citrobacter farmeri
Brite
KEGG Orthology (KO) [BR:
cfar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfar03400
]
CI104_07825
Enzymes [BR:
cfar01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CI104_07825
DNA repair and recombination proteins [BR:
cfar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CI104_07825
Prokaryotic type
CI104_07825
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AST79000
UniProt:
A0A8H9TVV0
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All DBs
Position
1597438..1598856
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AA seq
472 aa
AA seq
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MSTHLVWFRRDLRLHDHLALAAACRQRAARVVALFISTPGQWADHEMSPRQAAFIQAQLT
ALQTALAEKGIPLLFEEVNDFAASIETVKAVCEQQNVSHLFYHYQYEVNERERDAAVESA
LPNVVCEGFDDSVILPPGAVMTGNNEMYKVFTPFKNAWLKRLKEGMPVCVSAPERREGHD
VSTSLPPIRLNYPQQDFDQALFPAQEKAAIARLRQFCQQDAGEYDERRDFPAIEGTSRLS
ASLATGGLSPRQCLHRLLAEQPQALDGGAGSVWLNELIWRDFYRHLMTYHPELCKYRPFI
LWTDRVCWRDSAAHLQAWQEGKTGYPIVDAAMRQLNATGWMHNRLRMITASFLVKDLLID
WRKGERYFMSQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGEKFDSEGEFIRQW
IPELSAVPGKAIHEPWKWATKAGISLDYPQPIVDHKQARLETLAAYEAARKS
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgtccacccatctggtctggtttcgtcgcgatctccgtctgcatgaccatcttgccctt
gccgccgcctgccgccagcgggctgcgcgcgtcgtggcgttgtttatctccacgcctgga
cagtgggcggaccatgagatgtcaccgcggcaggccgcctttattcaggcccagttgacg
gccttacaaacggcgctcgcggaaaaaggcattccgctgctgtttgaagaggtcaatgat
tttgcggccagcatcgaaacggtgaaggcggtgtgtgaacagcaaaacgtcagccatctg
ttctaccactatcaatatgaagtgaatgagcgcgagcgcgatgcggcagtggaaagtgcg
ctgcccaatgtggtttgcgaagggtttgatgatagcgtgatcctgccgccgggcgcggtg
atgacgggaaataacgagatgtataaagtcttcacgccgtttaaaaacgcctggttaaaa
cggctgaaagagggaatgccggtatgcgtttccgcgcccgaacgacgtgaggggcatgac
gtttcgacatcgttaccgccgattaggcttaactatccgcagcaggattttgaccaggcc
cttttcccggcacaagagaaagccgcgattgcccggctacgccagttctgccagcaggac
gcgggagaatatgacgaacgacgtgactttccggccattgagggcaccagtcgtttgtcc
gccagtctggcaacgggaggcttgtcgccgcgccagtgtctgcatcgcctgctggcggaa
cagccgcaggcgctggatggcggtgcgggcagcgtctggctgaacgaacttatctggcgc
gatttttatcgccatctgatgacctaccatcctgaactgtgcaagtaccgtccctttatt
ctctggaccgatcgtgtgtgctggcgggacagtgcggcccatttgcaggcctggcaggag
ggaaaaacagggtatccgattgtcgatgcggcgatgcgacagctgaacgccactggctgg
atgcataaccgtctgcggatgattacggccagcttcctggtaaaagatctgctgatcgac
tggcgtaaaggcgagcgctatttcatgtcacaactgatagatggcgatctcgccgcgaat
aatggtggctggcagtgggctgcctccaccggaaccgacgccgcgccgtatttccgcatt
tttaatccgacgacgcagggtgaaaagttcgacagcgagggtgagtttatccgccagtgg
atcccggaacttagcgctgtgccgggtaaggcgatacacgagccgtggaaatgggcaaca
aaagcgggcatttccctcgactatccgcagcctattgtcgatcacaaacaggcgcgcctg
gagacacttgccgcgtatgaggccgcgcgaaaaagctaa
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