KEGG   Citrobacter farmeri: CI104_08295
Entry
CI104_08295       CDS       T05012                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
cfar  Citrobacter farmeri
Pathway
cfar03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cfar00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CI104_08295 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cfar03400]
    CI104_08295 (uvrB)
DNA repair and recombination proteins [BR:cfar03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CI104_08295 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      CI104_08295 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD SBDS_domain_II UB2H AAA_30 IF2_N DUF4686 AAA_22
Other DBs
NCBI-ProteinID: AST79082
LinkDB
Position
1684980..1687001
AA seq 673 aa
MSKPFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPT
MVLAPNKTLAAQLYGEMKEFFPDNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVIVVASVSAIYGLGDPDLYLKMMLHLTVGMIIDQRAILRRLAELQ
YTRNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQVESTISR
YTIYPKTHYVTPRERIVQAMEEIKVELADRRKVLLANDKLLEEQRLSQRTQFDLEMMNEL
GYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGGDVVDQVVRPTGLLD
PVIEVRPVATQVDDLLSEIRKRAQINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNINGKAILYGDKITASMAKAISETERRREKQQQYNEEHGIIPQGLNKKVVDILALG
QNIAKTRAKGRGKSRSSAASDVVELDMTPKALQQKIHELEGQMMQHAQNLEFEEAAQIRD
QLHQLRELFIAAS
NT seq 2022 nt   +upstreamnt  +downstreamnt
atgagtaaaccgttcaaactgaattccgcatttaaaccttccggcgatcagcctgaggca
atacgacgcctggaagagggactggaggacggcctggcgcaccagacgctgcttggcgta
acggggtcagggaaaacgttcactatcgccaatgtgattgccgatctacagcgcccgacg
atggtgctggcacccaacaaaacgctggcggcgcagctgtatggcgaaatgaaagagttt
ttcccggataacgccgtcgagtatttcgtctcttactacgactattatcagccggaagcg
tacgttcccagctctgataccttcatcgaaaaggatgcgtcggtgaacgaacacattgag
caaatgcgtttgtctgccaccaaagcattgctggagcgccgtgacgtgatcgtcgtggcg
tccgtttctgctatctatggtctgggcgacccggatttgtatctgaagatgatgctgcat
ttgacggtgggcatgattatcgatcagcgcgccattttgcgtcgactggccgaactgcaa
tatacccgtaacgatcaggctttccagcgcgggactttccgcgtgcgcggtgaggtgatc
gatatcttcccggcggaatccgacgatattgcactgcgcgttgaactgtttgacgaagag
gtggagcgtctgtcgctgtttgatccgctgaccgggcaggtggaatccaccatttcgcgc
tacaccatctaccctaaaacgcactacgtgaccccgcgtgaacgcattgtacaagcgatg
gaagagatcaaagtcgaactggccgatcgtcgcaaagtcctgctcgccaatgacaaactg
ctggaagagcagcgtctgagccaacgtactcagtttgatctggagatgatgaacgagctg
ggctactgctcagggattgaaaactactcgcgctttctgtcaggacgcgggccgggtgag
ccaccgccgacgttgtttgactatttgcccgccgacggtttgttggtggtggatgagtcc
cacgtgactatcccgcagattggcgggatgtatcgtggcgaccgcgcgcgtaaagagacg
ctggtggagtatggtttccgtctgccgtcggcgctggataaccgcccgttaaagttcgaa
gagtttgaagcgcttgcaccgcaaacgatctatgtttctgcgacgccgggcaattatgag
ctggagaaatcaggcggcgatgtggttgatcaggtcgtgcgcccgacagggttgctggat
ccggtgattgaagtacgtccggtagcaacgcaggtagacgatctgctctctgagatccgc
aaacgtgcgcagatcaacgaacgtgtcctggtaaccacgctgactaaacggatggcggaa
gatctcaccgagtatctggaagaacacggcgagcgggtgcgctatctgcactcggacatc
gacaccgtagagcgtatggaaatcattcgtgacctgcgtctgggcgagtttgatgtgctg
gtggggatcaacctgttgcgtgaaggtctcgacatgccggaggtgtcgctggtggcgatt
ctcgatgctgacaaggaagggttcctgcgttccgaacgttcgctgattcagaccattggt
cgtgcggcgcgtaacattaacggcaaagcgattctctacggcgacaaaattacggcctca
atggcgaaggcgattagcgaaaccgaacgccgtcgcgagaaacagcagcagtacaacgaa
gagcacggcattatcccgcagggcctgaataaaaaagtggtcgatattctggcgctgggg
cagaacattgcgaaaaccagggcgaagggcagaggcaagtcgcgttcctcggcggcgtcg
gatgtggtcgaactggacatgacgccaaaagcgctgcagcagaaaattcacgagctggaa
gggcagatgatgcagcatgcgcagaacctggagttcgaagaggccgcgcagattcgcgat
caactgcatcagctgcgtgaactgtttatcgcggcttcgtga

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