Citrobacter farmeri: CI104_08595
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Entry
CI104_08595 CDS
T05012
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
cfar
Citrobacter farmeri
Brite
KEGG Orthology (KO) [BR:
cfar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cfar03009
]
CI104_08595
Enzymes [BR:
cfar01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CI104_08595
Ribosome biogenesis [BR:
cfar03009
]
Prokaryotic type
ribosomal protein modification factors
CI104_08595
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
YajR_YAM
CLP1_P
TRAM
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
AST79135
UniProt:
A0A8H9NWP2
LinkDB
All DBs
Position
complement(1750451..1751776)
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AA seq
441 aa
AA seq
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MSKVTHQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDDADMVIVNTCGFIDSAV
QESLEAIGEALNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYVPKP
KHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGDVLSEAKR
LVDAGVKEILVISQDTSAYGVDVKHRTGFYNGEPVKTSMVSLCEQLSKLGIWTRLHYVYP
YPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSVDRQLARIKQWRDICPELTL
RSTFIVGFPGETEDDFQMLLDFLKEARLDRVGCFKYSPVDGAGANELPDQVPEEVKEDRW
NRFMQLQQQISAERLQEKVGREILVIVDEVDEEGAIGRSMADAPEIDGAVYLNGETNVKP
GDVIRVKVENADEYDLWGTRV
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagtaacccaccagccgaaaatcggcttcgtttcccttggctgtccgaaaaac
ctcgtcgattcggaacgtatcctgactgaactgcgtaccgaaggctacgatgttgtcccg
agctacgacgatgccgatatggtgatcgtcaacacctgcggttttatcgacagcgcagtg
caggaatcactggaggccattggcgaagcgctgaacgaaaacggtaaagtgatcgtaacc
ggctgtctgggcgcgaaagaagatcagatccgtgaagtccatccgaaagtgctggaaatc
accggtccgcatagctatgaacaggttctggaacacgtccaccactacgtgccgaaacca
aagcacaatccgttcctgagcctggtgcctgaacagggcgtgaagctgactccacgccat
tatgcctacctgaaaatttctgaaggctgcaaccatcgctgcaccttctgcatcattcca
tcaatgcgtggcgatctggtcagccgtccaattggtgatgtgctgagcgaagcaaagcgg
ctggtcgatgcgggtgtcaaggagatcctcgtgatttcgcaggatacctcagcctacggc
gtggacgtgaagcaccgcaccgggttctataacggtgagccggtgaaaaccagtatggtc
agcctgtgcgaacagttgtcaaaactgggcatctggacgcgtctgcactacgtctatccg
tatccgcatgtcgacgacgttatcccgctgatggcagaaggcaagatcctgccgtacctg
gatatcccacttcagcacgccagcccgcgcattctcaaactgatgaagcgccccggttcg
gtagaccgccaactggcgcgcatcaaacaatggcgcgacatctgtccggaactgaccctg
cgctcgacgtttattgtcggtttcccgggggaaacggaagacgatttccagatgctgctc
gacttcctgaaagaagcgcgtctcgaccgcgtaggctgctttaaatacagcccggtagac
ggggcgggtgccaatgaactgcccgatcaggtgccggaagaggttaaagaagatcgctgg
aaccgctttatgcaactgcagcagcaaatctctgctgaacgactgcaggagaaagtgggt
cgcgaaattctggtgattgtcgatgaagttgatgaagaaggcgcgattggccgcagtatg
gccgacgcaccggaaatcgacggcgcggtctatctgaatggtgaaaccaacgtgaaaccg
ggcgacgtgatccgcgtgaaggtggaaaacgccgacgagtacgatctgtggggcacgcgg
gtttaa
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